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PDBsum entry 4toe
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Tunnel analysis for: 4toe calculated with  MOLE 2.0
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PDB id
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4toe
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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8 tunnels,
coloured by tunnel radius |
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7 tunnels,
coloured by
tunnel radius
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7 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.18 |
1.24 |
112.0 |
-1.42 |
-0.02 |
28.4 |
80 |
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12 |
11 |
3 |
13 |
4 |
0 |
0 |
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FE2 205 F SO4 207 F FE2 206 G HEM 208 G FE2 205 J
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2 |
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1.16 |
1.27 |
163.4 |
-1.99 |
-0.05 |
33.6 |
81 |
25 |
10 |
2 |
13 |
4 |
0 |
0 |
HEM 207 A HEM 207 D HEM 207 E FE2 205 F SO4 207 F
FE2 206 G HEM 208 G HEM 207 I FE2 205 J HEM 207 L
HEM 207 M HEM 207 O HEM 208 R HEM 206 T HEM 206 V
HEM 207 W
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3 |
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1.22 |
4.13 |
168.7 |
-1.99 |
0.05 |
34.9 |
82 |
25 |
9 |
3 |
12 |
4 |
0 |
0 |
HEM 207 A HEM 207 D HEM 207 E FE2 205 F SO4 207 F
FE2 206 G HEM 208 G HEM 207 I FE2 205 J HEM 207 L
HEM 207 M HEM 207 O HEM 208 R HEM 206 T HEM 206 V
HEM 207 W
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4 |
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1.18 |
1.18 |
167.5 |
-1.98 |
0.03 |
35.2 |
82 |
26 |
11 |
3 |
13 |
4 |
0 |
0 |
HEM 207 A HEM 207 D HEM 207 E FE2 205 F SO4 207 F
FE2 206 G HEM 208 G HEM 207 I FE2 205 J HEM 207 L
HEM 207 M HEM 207 O HEM 208 R HEM 206 T HEM 206 V
HEM 207 W
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5 |
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1.21 |
1.30 |
168.5 |
-2.04 |
0.01 |
35.9 |
82 |
26 |
11 |
3 |
13 |
4 |
0 |
0 |
HEM 207 A HEM 207 D HEM 207 E FE2 205 F SO4 207 F
FE2 206 G HEM 208 G HEM 207 I FE2 205 J HEM 207 L
HEM 207 M HEM 207 O HEM 208 R HEM 206 T HEM 206 V
HEM 207 W
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6 |
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1.16 |
1.31 |
169.9 |
-2.22 |
-0.01 |
36.9 |
83 |
26 |
9 |
5 |
12 |
4 |
0 |
0 |
HEM 207 A HEM 207 D HEM 207 E FE2 205 F SO4 207 F
FE2 206 G HEM 208 G HEM 207 I FE2 205 J HEM 207 L
HEM 207 M HEM 207 O HEM 208 R HEM 206 T HEM 206 V
HEM 207 W
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7 |
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1.21 |
1.32 |
214.0 |
-1.91 |
-0.01 |
33.0 |
82 |
31 |
11 |
6 |
16 |
5 |
0 |
0 |
HEM 207 A HEM 207 D HEM 207 E FE2 205 F SO4 207 F
FE2 206 G HEM 208 G HEM 207 I FE2 205 J HEM 207 L
HEM 207 M HEM 207 O HEM 208 R HEM 206 T HEM 206 V
HEM 207 W
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program