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PDBsum entry 4tnh

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Electron transport,photosynthesis PDB id
4tnh
Contents
Protein chains
335 a.a.
490 a.a.
447 a.a.
340 a.a.
82 a.a.
35 a.a.
65 a.a.
35 a.a.
34 a.a.
37 a.a.
37 a.a.
34 a.a.
243 a.a.
32 a.a.
97 a.a.
137 a.a.
28 a.a.
37 a.a.
28 a.a.
62 a.a.
Ligands
CLA ×70
PL9 ×6
BCR ×24
DGD ×14
LHG ×4
LMG ×22
OEX ×2
SQD ×10
LMT ×14
PHO ×4
BCT
HEM
Metals
_CA
FE2
_CL ×2
procheck   Generate full PROCHECK analyses

PROCHECK summary for 4tnh

Ramachandran plot

PROCHECK statistics

1. Ramachandran Plot statistics


                                         No. of
                                        residues     %-tage
                                         ------      ------
Most favoured regions      [A,B,L]         3788       85.5%*  
Additional allowed regions [a,b,l,p]        600       13.6%          
Generously allowed regions [~a,~b,~l,~p]     30        0.7%          
Disallowed regions         [XX]              10        0.2%*  
                                           ----      ------
Non-glycine and non-proline residues       4428      100.0%

End-residues (excl. Gly and Pro)             72

Glycine residues                            496
Proline residues                            274
                                           ----
Total number of residues                   5270


Based on an analysis of 118 structures of resolution of at least 2.0 Angstroms and R-factor no greater than 20.0 a good quality model would be expected to have over 90% in the most favoured regions [A,B,L].


2. G-Factors

                                                Average
Parameter                            Score       Score
---------                            -----       -----
Dihedral angles:-
     Phi-psi distribution            -0.30      
     Chi1-chi2 distribution          -0.16      
     Chi1 only                        0.05      
     Chi3 & chi4                      0.51      
     Omega                            0.03      
                                                  -0.07      
                                                  =====
Main-chain covalent forces:-
     Main-chain bond lengths          0.68      
     Main-chain bond angles           0.61      
                                                   0.64      
                                                  =====

     OVERALL AVERAGE                               0.22      
                                                  =====

G-factors provide a measure of how unusual, or out-of-the-ordinary, a property is.

Values below -0.5*  - unusual
Values below -1.0** - highly unusual
Important note: The main-chain bond-lengths and bond angles are compared with the Engh & Huber (1991) ideal values derived from small-molecule data. Therefore, structures refined using different restraints may show apparently large deviations from normality.

 

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