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PDBsum entry 4tmf
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Pore analysis for: 4tmf calculated with  MOLE 2.0
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PDB id
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4tmf
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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12 pores,
coloured by radius |
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9 pores,
coloured by radius
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9 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.16 |
2.38 |
26.4 |
-1.83 |
-0.35 |
21.7 |
79 |
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2 |
4 |
1 |
0 |
3 |
0 |
0 |
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2 |
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1.44 |
1.59 |
29.3 |
-1.41 |
-0.20 |
20.4 |
81 |
4 |
3 |
4 |
2 |
3 |
0 |
0 |
JS2 401 A
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3 |
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2.15 |
2.22 |
30.6 |
-2.23 |
-0.48 |
26.0 |
75 |
3 |
4 |
2 |
0 |
4 |
0 |
0 |
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4 |
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2.48 |
2.67 |
32.3 |
-2.07 |
-0.19 |
23.9 |
85 |
6 |
2 |
3 |
2 |
1 |
1 |
0 |
JS2 401 B
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5 |
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1.65 |
2.03 |
33.1 |
-2.21 |
-0.32 |
29.0 |
82 |
4 |
4 |
1 |
2 |
1 |
1 |
0 |
JS2 401 B
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6 |
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1.65 |
1.67 |
39.0 |
-2.45 |
-0.36 |
29.0 |
82 |
4 |
4 |
3 |
2 |
2 |
1 |
0 |
JS2 401 B
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7 |
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1.67 |
2.61 |
41.6 |
-2.75 |
-0.77 |
21.0 |
85 |
5 |
5 |
5 |
0 |
0 |
1 |
0 |
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8 |
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1.46 |
1.60 |
44.8 |
-1.91 |
-0.28 |
24.5 |
82 |
7 |
5 |
6 |
2 |
3 |
0 |
0 |
JS2 401 A
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9 |
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1.15 |
1.96 |
48.8 |
-1.87 |
-0.49 |
22.3 |
84 |
7 |
3 |
3 |
2 |
2 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program