spacer
spacer

PDBsum entry 4tmc

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 4tmc calculated with MOLE 2.0 PDB id
4tmc
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
1 pore, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.61 1.74 35.9 -2.48 -0.53 26.3 85 6 3 2 1 1 0 0  
2 1.47 1.53 47.9 -0.55 0.11 5.4 76 2 3 5 4 7 2 0  FMN 501 C HBA 502 C
3 1.24 1.53 28.9 -0.99 0.34 12.5 62 3 0 0 2 7 2 0  FMN 501 B HBA 502 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer