 |
PDBsum entry 4s1v
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 4s1v calculated with MOLE 2.0
|
PDB id
|
|
|
|
4s1v
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
10 pores,
coloured by radius |
 |
10 pores,
coloured by radius
|
10 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.91 |
3.02 |
30.3 |
-1.18 |
-0.46 |
7.5 |
80 |
 |
1 |
0 |
4 |
1 |
0 |
3 |
0 |
 |
|
 |
 |
2 |
 |
1.15 |
1.28 |
65.3 |
-0.21 |
-0.17 |
14.1 |
76 |
6 |
3 |
3 |
11 |
1 |
2 |
0 |
|
 |
3 |
 |
1.80 |
2.68 |
73.6 |
-1.67 |
-0.47 |
16.3 |
82 |
8 |
2 |
7 |
2 |
0 |
6 |
0 |
|
 |
4 |
 |
1.19 |
1.29 |
75.6 |
0.10 |
-0.12 |
5.8 |
77 |
2 |
1 |
7 |
11 |
1 |
4 |
0 |
|
 |
5 |
 |
2.08 |
2.15 |
76.5 |
-1.17 |
-0.42 |
17.8 |
82 |
4 |
3 |
4 |
5 |
0 |
3 |
0 |
|
 |
6 |
 |
1.77 |
2.70 |
88.6 |
-1.24 |
-0.51 |
14.8 |
85 |
7 |
5 |
7 |
7 |
0 |
4 |
0 |
|
 |
7 |
 |
1.16 |
1.28 |
92.3 |
0.08 |
-0.23 |
7.3 |
80 |
2 |
4 |
7 |
16 |
1 |
3 |
0 |
|
 |
8 |
 |
1.72 |
1.80 |
127.4 |
-1.26 |
-0.42 |
16.1 |
84 |
8 |
6 |
7 |
7 |
0 |
5 |
0 |
|
 |
9 |
 |
1.17 |
3.25 |
131.2 |
-0.14 |
-0.20 |
9.7 |
79 |
4 |
5 |
7 |
16 |
1 |
4 |
0 |
|
 |
10 |
 |
1.20 |
1.20 |
29.9 |
1.83 |
0.50 |
4.3 |
67 |
1 |
0 |
1 |
8 |
1 |
1 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |