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PDBsum entry 4rf8

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 4rf8 calculated with MOLE 2.0 PDB id
4rf8
Pores calculated on whole structure Pores calculated excluding ligands

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6 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.80 2.80 62.7 -2.44 -0.20 34.6 78 13 3 1 3 2 2 0  ADP 1001 A
2 1.98 3.01 85.9 -2.45 -0.26 32.2 77 14 5 1 3 3 2 0  
3 1.60 1.77 36.1 -2.13 -0.50 16.2 84 5 2 4 0 2 1 0  NO3 1004 A NO3 805 B EPE 813 B
4 1.62 1.75 59.0 -1.62 -0.56 10.6 85 3 4 7 0 4 1 0  NO3 1004 A NO3 801 B NO3 804 B
5 1.89 1.89 59.8 -2.21 -0.37 26.0 76 7 4 3 1 4 2 0  EPE 813 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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