PDBsum entry 4ret Go to PDB code:  Pore analysis for: 4ret calculated with MOLE 2.0 PDB id 4ret Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   17 pores, coloured by radius 13 pores, coloured by radius 13 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.96 2.13 42.8 -0.95 -0.29 9.7 87 4 0 5 2 2 1 0  CLR 2006 C GLC 1 I FRU 2 I 2 1.73 2.04 89.5 0.80 0.42 6.0 80 5 1 6 7 10 1 0  CLR 2006 C CLR 1001 G GLC 1 H FRU 2 H FRU 2 I 3 1.72 2.39 119.3 -0.01 0.02 9.7 83 6 5 8 11 7 2 0  CLR 1104 A CLR 2004 C 4 1.27 1.37 146.2 -1.59 -0.32 19.2 83 12 4 11 11 1 3 0   5 1.89 1.89 157.7 -1.52 -0.21 25.3 85 10 10 4 7 1 2 0   6 1.60 2.68 162.3 -1.09 -0.19 20.5 83 10 9 7 12 1 3 0   7 1.20 1.34 187.2 -1.20 -0.22 20.4 81 14 10 9 16 3 2 0  CLR 2006 C 8 1.18 1.43 215.6 -0.07 -0.04 13.2 82 10 8 9 20 6 3 0  CLR 1104 A DGX 1107 A CLR 2004 C 9 1.29 2.05 233.2 -0.57 -0.02 14.7 81 14 10 13 13 12 3 0  CLR 2006 C CLR 1001 G FRU 2 H GLC 1 I FRU 2 I 10 1.14 2.19 244.2 -0.36 0.10 15.8 83 18 8 12 19 10 4 0  CLR 2006 C CLR 1001 G FRU 2 H FRU 2 I 11 1.19 1.42 256.3 -1.48 -0.28 21.8 83 18 13 10 14 2 2 0   12 1.19 1.28 316.2 -0.42 0.03 14.1 78 21 8 15 25 14 6 0  CLR 2006 C CLR 1001 G GLC 1 H FRU 2 H FRU 2 I 13 1.19 1.27 363.8 -1.39 -0.29 21.0 84 25 14 16 23 4 6 0  DGX 1107 A CLR 1001 G GLC 1 H FRU 2 H Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.