 |
PDBsum entry 4qwj
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 4qwj calculated with MOLE 2.0
|
PDB id
|
|
|
|
4qwj
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
30 pores,
coloured by radius |
 |
30 pores,
coloured by radius
|
30 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.99 |
2.18 |
76.7 |
-2.56 |
-0.47 |
25.9 |
74 |
 |
11 |
5 |
3 |
1 |
6 |
0 |
0 |
 |
|
 |
 |
2 |
 |
1.36 |
1.49 |
102.2 |
-1.56 |
-0.47 |
20.9 |
78 |
6 |
12 |
5 |
4 |
2 |
5 |
0 |
|
 |
3 |
 |
1.26 |
1.54 |
102.7 |
-2.49 |
-0.45 |
25.3 |
79 |
13 |
3 |
8 |
2 |
6 |
1 |
0 |
|
 |
4 |
 |
1.60 |
1.97 |
106.3 |
-1.78 |
-0.35 |
19.1 |
79 |
11 |
5 |
7 |
6 |
6 |
1 |
1 |
|
 |
5 |
 |
1.19 |
1.21 |
106.5 |
-1.02 |
-0.10 |
15.3 |
76 |
9 |
2 |
7 |
6 |
10 |
3 |
0 |
|
 |
6 |
 |
1.91 |
2.19 |
106.6 |
-2.61 |
-0.46 |
29.2 |
79 |
17 |
8 |
6 |
3 |
6 |
0 |
0 |
|
 |
7 |
 |
1.53 |
1.70 |
111.3 |
-1.85 |
-0.24 |
20.6 |
76 |
12 |
6 |
9 |
5 |
9 |
1 |
0 |
|
 |
8 |
 |
1.78 |
2.10 |
112.6 |
-2.28 |
-0.39 |
24.6 |
81 |
13 |
6 |
10 |
5 |
8 |
0 |
0 |
|
 |
9 |
 |
1.35 |
1.35 |
131.8 |
-2.34 |
-0.59 |
22.8 |
81 |
8 |
10 |
8 |
0 |
3 |
2 |
0 |
|
 |
10 |
 |
1.86 |
2.06 |
137.6 |
-1.47 |
-0.24 |
17.9 |
76 |
13 |
5 |
9 |
7 |
9 |
2 |
0 |
|
 |
11 |
 |
1.73 |
2.27 |
139.6 |
-2.61 |
-0.54 |
30.7 |
81 |
18 |
12 |
8 |
5 |
5 |
1 |
0 |
|
 |
12 |
 |
1.51 |
2.90 |
138.3 |
-2.22 |
-0.35 |
22.0 |
78 |
12 |
7 |
9 |
4 |
7 |
1 |
0 |
|
 |
13 |
 |
1.67 |
2.28 |
152.6 |
-2.34 |
-0.51 |
26.5 |
83 |
18 |
7 |
10 |
5 |
6 |
1 |
0 |
|
 |
14 |
 |
2.39 |
3.42 |
172.7 |
-2.41 |
-0.46 |
22.2 |
83 |
13 |
3 |
14 |
5 |
7 |
0 |
0 |
|
 |
15 |
 |
2.04 |
2.02 |
180.7 |
-2.61 |
-0.49 |
24.2 |
82 |
17 |
5 |
11 |
3 |
7 |
0 |
0 |
|
 |
16 |
 |
1.27 |
1.51 |
190.1 |
-2.43 |
-0.43 |
23.3 |
83 |
18 |
3 |
15 |
3 |
8 |
1 |
0 |
|
 |
17 |
 |
2.05 |
3.12 |
193.4 |
-2.37 |
-0.46 |
23.8 |
84 |
17 |
7 |
15 |
6 |
9 |
0 |
0 |
|
 |
18 |
 |
1.52 |
2.63 |
197.0 |
-2.71 |
-0.55 |
26.6 |
83 |
18 |
8 |
14 |
5 |
4 |
1 |
0 |
|
 |
19 |
 |
1.49 |
1.50 |
201.7 |
-1.95 |
-0.41 |
22.0 |
83 |
15 |
12 |
12 |
7 |
8 |
1 |
0 |
|
 |
20 |
 |
1.86 |
2.13 |
202.2 |
-2.53 |
-0.51 |
25.7 |
83 |
20 |
9 |
12 |
4 |
9 |
0 |
0 |
|
 |
21 |
 |
1.71 |
1.94 |
209.9 |
-2.05 |
-0.42 |
21.5 |
84 |
20 |
9 |
15 |
9 |
9 |
1 |
1 |
|
 |
22 |
 |
1.27 |
1.50 |
211.0 |
-2.36 |
-0.44 |
25.2 |
84 |
22 |
7 |
15 |
4 |
10 |
1 |
0 |
|
 |
23 |
 |
1.51 |
1.70 |
215.9 |
-1.99 |
-0.33 |
22.1 |
82 |
20 |
11 |
16 |
6 |
12 |
1 |
0 |
|
 |
24 |
 |
1.29 |
1.44 |
232.0 |
-1.63 |
-0.30 |
19.2 |
82 |
20 |
6 |
17 |
9 |
13 |
3 |
0 |
|
 |
25 |
 |
1.28 |
1.52 |
238.2 |
-2.11 |
-0.45 |
23.1 |
84 |
19 |
12 |
16 |
6 |
6 |
1 |
2 |
3BV 301 H 3BV 201 N
|
 |
26 |
 |
1.83 |
2.11 |
239.9 |
-1.78 |
-0.33 |
20.1 |
81 |
21 |
9 |
16 |
8 |
12 |
2 |
0 |
|
 |
27 |
 |
1.70 |
1.65 |
240.1 |
-1.89 |
-0.41 |
20.2 |
81 |
16 |
8 |
15 |
6 |
7 |
3 |
0 |
|
 |
28 |
 |
1.33 |
1.33 |
243.0 |
-2.15 |
-0.40 |
20.1 |
82 |
17 |
7 |
17 |
5 |
9 |
1 |
0 |
|
 |
29 |
 |
1.19 |
1.52 |
271.4 |
-2.13 |
-0.48 |
23.6 |
84 |
24 |
16 |
17 |
6 |
8 |
1 |
2 |
3BV 301 H 3BV 201 N
|
 |
30 |
 |
1.83 |
1.77 |
262.5 |
-2.32 |
-0.49 |
25.7 |
85 |
28 |
11 |
18 |
7 |
10 |
1 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |