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PDBsum entry 4qw9

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Top Page protein dna_rna ligands metals tunnels links
Tunnel analysis for: 4qw9 calculated with MOLE 2.0 PDB id
4qw9
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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2 tunnels, coloured by tunnel radius 2 tunnels, coloured by tunnel radius 2 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.74 1.80 20.8 1.50 0.59 11.2 90 2 0 0 6 0 0 0  DT 12 C DA 4 D DG 5 D DG 6 D DA 7 D
2 1.72 1.78 26.3 -1.05 -0.13 23.8 94 4 0 2 2 0 0 0  DT 4 C DA 5 C DG 8 D DT 9 D DC 10 D DC 11 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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