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PDBsum entry 4qw5

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Pore analysis for: 4qw5 calculated with MOLE 2.0 PDB id
4qw5
Pores calculated on whole structure Pores calculated excluding ligands

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30 pores, coloured by radius 30 pores, coloured by radius 30 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.68 1.84 77.4 -1.16 -0.27 23.3 80 10 7 2 6 2 0 0  
2 1.94 2.12 94.6 -2.40 -0.42 25.3 77 14 7 5 2 7 1 0  
3 1.23 1.41 97.5 -2.09 -0.31 20.8 77 9 6 7 7 7 2 0  
4 1.59 1.82 106.5 -1.76 -0.31 19.8 78 13 6 7 6 7 1 1  
5 1.35 1.36 117.1 -2.02 -0.37 22.4 82 11 9 11 8 5 1 0  
6 1.26 1.28 122.0 -1.41 -0.26 18.3 76 16 5 7 11 7 1 1  
7 1.25 1.42 137.0 -1.64 -0.31 20.4 81 13 8 11 13 5 1 0  
8 1.61 4.13 144.1 -2.14 -0.42 24.1 78 14 12 7 4 9 2 0  
9 1.15 1.86 148.5 -2.06 -0.39 24.4 79 20 5 9 8 6 2 0  
10 1.83 2.09 154.1 -1.58 -0.24 19.3 76 17 7 10 9 10 3 0  
11 1.97 2.09 158.6 -1.68 -0.40 17.6 83 11 5 12 7 8 1 0  3BV 301 Y MES 303 Y
12 1.87 1.96 170.0 -1.77 -0.38 20.4 81 12 10 11 8 9 1 0  
13 1.19 1.36 169.3 -1.26 -0.21 17.4 76 20 6 9 14 9 3 0  
14 1.83 1.99 173.0 -1.89 -0.45 20.9 83 15 9 13 9 8 3 0  3BV 301 K
15 1.21 1.30 173.9 -1.34 -0.34 16.0 81 14 4 11 12 7 1 0  3BV 301 Y MES 303 Y
16 1.24 1.51 185.2 -1.44 -0.33 18.5 79 15 9 10 13 8 1 0  
17 1.24 1.52 188.3 -1.52 -0.37 18.8 82 18 8 12 14 7 3 0  3BV 301 K
18 1.58 1.79 189.9 -1.66 -0.35 20.5 82 17 13 13 11 9 3 0  3BV 301 K
19 1.53 1.85 196.3 -2.13 -0.39 21.0 79 18 6 14 6 12 2 1  
20 2.31 3.37 196.6 -2.40 -0.42 23.4 80 15 5 14 4 12 1 0  
21 1.20 1.52 211.6 -1.74 -0.32 19.1 78 21 5 13 11 11 2 1  
22 1.61 1.74 213.8 -2.65 -0.49 27.0 80 20 10 13 4 9 2 0  
23 1.69 1.86 213.8 -2.07 -0.34 21.8 80 18 10 14 6 13 2 0  
24 1.24 1.26 211.9 -1.98 -0.35 21.2 79 18 4 13 9 11 1 0  
25 1.20 1.19 221.3 -1.81 -0.32 19.8 78 18 4 15 7 15 3 0  
26 1.34 1.48 229.1 -2.21 -0.43 23.8 79 23 9 12 9 8 2 0  
27 1.44 1.39 229.0 -1.75 -0.31 20.0 79 21 9 13 11 12 2 0  
28 1.32 1.34 229.3 -2.34 -0.44 23.5 83 19 10 19 9 10 1 0  
29 1.18 1.31 236.6 -1.51 -0.27 18.0 78 21 3 14 12 14 3 0  
30 1.25 1.24 244.6 -2.00 -0.38 21.4 82 22 9 18 14 10 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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