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PDBsum entry 4qw4
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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 4qw4 calculated with MOLE 2.0 PDB id
4qw4
Tunnels calculated on whole structure Tunnels calculated excluding ligands
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63 tunnels, coloured by tunnel radius 101 tunnels, coloured by tunnel radius 101 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.38 1.49 75.8 -0.48 -0.14 11.4 82 7 2 5 9 6 1 2  3BV 301 H MES 302 H 3BV 201 N
2 1.27 1.89 100.2 -0.79 -0.25 11.6 85 8 3 8 7 4 2 2  3BV 301 V MES 303 V 3BV 201 b
3 1.27 1.89 101.2 -0.80 -0.26 11.2 85 8 3 8 7 4 2 2  3BV 301 H MES 302 H 3BV 201 N
4 1.38 1.49 102.3 -0.84 -0.23 12.2 85 6 4 10 11 7 1 0  3BV 301 H MES 302 H 3BV 201 N 3BV 301 Y
5 1.27 1.94 103.6 -1.07 -0.32 11.5 86 8 3 9 6 5 2 2  3BV 301 V MES 303 V 3BV 201 b
6 1.27 2.37 108.0 -0.88 -0.26 10.9 86 8 3 9 7 4 2 2  3BV 301 H MES 302 H 3BV 201 N
7 1.27 2.28 107.6 -1.03 -0.38 10.2 89 7 2 12 9 3 2 0  3BV 201 N 3BV 301 Y
8 1.28 1.95 109.9 -1.09 -0.43 10.0 89 7 2 13 9 3 2 0  3BV 301 Y 3BV 201 b
9 1.27 2.24 111.3 -1.04 -0.33 10.5 87 7 3 12 9 5 2 0  3BV 301 K 3BV 201 b
10 1.27 1.93 114.3 -1.09 -0.39 10.2 87 7 3 13 9 5 2 0  3BV 301 K 3BV 201 N
11 1.36 1.48 120.5 -1.01 -0.29 12.1 84 6 5 12 11 9 1 0  3BV 301 H MES 302 H 3BV 301 K 3BV 201 N
12 1.29 2.22 132.4 -2.17 -0.41 21.8 83 13 4 10 4 5 2 0  3BV 201 N
13 1.27 2.24 133.8 -2.15 -0.38 22.6 83 13 4 10 5 5 2 0  3BV 201 b
14 1.30 1.88 137.6 -1.83 -0.29 17.5 82 10 2 12 5 8 1 0  3BV 201 b
15 1.28 2.23 135.3 -1.86 -0.33 18.0 82 10 2 12 5 8 1 0  3BV 201 N
16 1.30 2.23 137.6 -1.66 -0.32 16.7 81 14 3 13 7 8 2 1  3BV 201 N
17 1.29 1.89 137.8 -1.50 -0.26 16.1 81 14 3 12 7 9 1 1  3BV 201 b
18 1.38 1.48 138.8 -2.05 -0.29 23.3 81 12 6 9 6 9 1 0  3BV 301 H MES 302 H 3BV 201 N
19 1.40 1.50 138.4 -1.22 -0.28 14.7 84 9 6 12 9 8 1 2  3BV 301 H MES 302 H 3BV 201 N 3BV 301 V MES 303 V
3BV 201 b
20 1.28 2.20 138.2 -2.13 -0.35 21.5 83 11 4 10 4 5 2 0  3BV 201 N
21 1.27 2.26 139.2 -2.19 -0.37 22.6 83 11 4 10 5 5 2 0  3BV 201 b
22 1.27 2.24 138.4 -1.97 -0.32 19.4 86 13 1 14 4 6 1 0  3BV 201 b
23 1.27 2.24 139.9 -1.76 -0.26 17.4 84 13 3 14 6 6 1 0  3BV 201 b
24 1.27 2.23 141.1 -1.83 -0.31 17.7 82 8 2 12 5 8 1 0  3BV 201 N
25 1.30 1.88 143.1 -1.79 -0.27 17.1 83 8 2 12 5 7 1 0  3BV 201 b
26 1.30 2.24 143.3 -1.75 -0.33 18.9 84 13 4 13 5 7 1 0  3BV 201 N
27 1.38 1.48 141.8 -1.73 -0.23 19.4 80 9 4 11 7 12 0 0  3BV 301 H MES 302 H 3BV 201 N
28 1.30 2.23 141.7 -1.91 -0.39 18.3 85 12 5 13 4 5 1 0  3BV 201 b
29 1.29 2.23 143.4 -1.64 -0.28 16.2 81 11 3 13 7 8 2 1  3BV 201 N
30 1.29 1.89 141.5 -1.93 -0.39 18.7 84 11 5 13 4 6 1 0  3BV 201 N
31 1.29 1.89 143.2 -1.52 -0.24 16.1 81 11 3 12 7 9 1 1  3BV 201 b
32 1.28 1.90 143.0 -1.99 -0.34 22.1 84 16 4 12 5 7 2 0  3BV 201 N
33 1.28 1.90 142.6 -2.05 -0.37 20.2 81 14 4 10 3 8 1 0  3BV 201 N
34 1.29 2.23 142.2 -1.73 -0.32 18.5 84 13 5 13 6 7 1 0  3BV 201 b
35 1.38 1.48 144.0 -1.57 -0.22 17.8 79 13 5 12 9 12 1 1  3BV 301 H MES 302 H 3BV 201 N
36 1.30 1.85 143.8 -2.00 -0.34 20.1 81 14 4 10 3 8 1 0  3BV 201 b
37 1.29 1.86 143.1 -1.99 -0.34 22.0 84 16 4 12 6 7 2 0  3BV 201 b
38 1.30 2.25 144.5 -1.72 -0.26 16.9 84 14 3 15 6 6 1 0  3BV 201 N
39 1.26 1.93 145.0 -1.97 -0.33 19.4 81 13 5 14 7 7 2 0  3BV 201 b
40 1.30 1.51 145.3 -1.97 -0.32 19.2 86 15 1 14 4 6 1 0  3BV 201 N
41 1.26 1.90 144.3 -1.98 -0.34 19.3 81 13 5 14 7 7 2 0  3BV 201 N
42 1.27 2.26 145.4 -1.77 -0.21 17.7 84 11 3 14 6 6 1 0  3BV 201 b
43 1.27 2.25 143.8 -1.97 -0.29 19.3 86 11 1 14 4 6 1 0  3BV 201 b
44 1.23 1.20 146.4 -1.21 -0.21 14.7 81 12 1 13 7 8 2 0  3BV 201 b
45 1.27 1.92 146.5 -1.45 -0.23 16.4 80 11 3 11 7 6 3 0  3BV 201 N
46 1.25 1.28 147.6 -1.27 -0.25 14.7 81 12 1 13 7 8 2 0  3BV 201 N
47 1.28 1.86 147.6 -1.47 -0.23 16.8 79 11 3 11 8 6 3 0  3BV 201 b
48 1.31 2.24 147.2 -1.90 -0.35 18.4 84 10 5 13 4 6 1 0  3BV 201 b
49 1.27 1.90 149.0 -1.93 -0.36 21.1 84 14 6 13 5 7 1 0  3BV 201 b
50 1.30 1.88 147.3 -1.95 -0.36 18.5 83 9 5 13 4 7 1 0  3BV 201 N
51 1.26 1.95 148.7 -2.00 -0.39 21.1 83 14 7 13 5 8 1 0  3BV 201 N
52 1.38 1.48 149.8 -1.67 -0.24 20.5 82 12 6 12 8 11 0 0  3BV 301 H MES 302 H 3BV 201 N
53 1.38 1.48 147.9 -1.80 -0.29 20.0 82 10 7 12 6 10 0 0  3BV 301 H MES 302 H 3BV 201 N
54 1.39 1.49 149.4 -1.89 -0.27 22.9 81 15 6 11 7 11 1 0  3BV 301 H MES 302 H 3BV 201 N
55 1.29 1.89 148.5 -2.03 -0.34 19.8 81 12 4 10 3 8 1 0  3BV 201 N
56 1.39 1.49 149.1 -1.90 -0.26 21.6 79 13 6 9 5 12 0 0  3BV 301 H MES 302 H 3BV 201 N
57 1.29 2.24 147.7 -1.74 -0.31 18.4 84 11 5 13 6 7 1 0  3BV 201 b
58 1.29 1.88 148.8 -2.00 -0.33 21.5 83 14 4 12 5 7 2 0  3BV 201 N
59 1.29 1.90 148.6 -2.02 -0.33 21.8 83 14 4 12 5 7 2 0  3BV 201 b
60 1.30 1.89 149.3 -2.02 -0.33 19.6 81 12 4 10 3 8 1 0  3BV 201 b
61 1.26 1.92 150.1 -1.98 -0.33 19.1 81 11 5 14 7 7 2 0  3BV 201 N
62 1.26 1.93 150.5 -1.98 -0.30 19.7 81 10 5 14 7 7 2 0  3BV 201 b
63 1.26 2.09 149.1 -1.79 -0.35 18.3 82 12 6 14 8 8 1 0  3BV 201 b
64 1.41 1.50 150.7 -1.93 -0.28 21.0 79 12 7 13 9 11 1 0  3BV 301 H MES 302 H 3BV 201 N
65 1.29 2.22 149.1 -1.77 -0.30 19.2 84 11 4 13 5 7 1 0  3BV 201 N
66 1.38 1.48 151.0 -1.64 -0.17 18.7 82 13 5 14 8 10 0 0  3BV 301 H MES 302 H 3BV 201 N
67 1.31 1.48 151.8 -1.84 -0.21 20.8 84 14 3 13 6 10 0 0  3BV 301 H MES 302 H 3BV 201 N
68 1.28 1.91 153.0 -1.40 -0.21 16.1 79 8 3 11 8 6 3 0  3BV 201 b
69 1.27 1.87 151.6 -1.29 -0.23 15.2 80 14 2 12 9 7 2 0  3BV 201 b
70 1.23 1.21 151.9 -1.20 -0.20 14.4 81 10 1 13 7 8 2 0  3BV 201 b
71 1.27 1.90 154.5 -1.97 -0.34 21.2 84 12 6 13 5 7 1 0  3BV 201 b
72 1.39 1.49 153.0 -1.36 -0.16 17.8 78 10 5 10 9 10 2 0  3BV 301 H MES 302 H 3BV 201 N
73 1.29 2.21 150.3 -1.67 -0.23 16.1 84 12 3 15 6 6 1 0  3BV 201 N
74 1.23 1.20 153.4 -1.25 -0.23 14.4 81 10 1 13 7 8 2 0  3BV 201 N
75 1.28 1.90 152.3 -1.42 -0.21 15.9 79 9 3 11 7 6 3 0  3BV 201 N
76 1.29 2.21 151.1 -1.95 -0.27 19.0 86 13 1 14 4 6 1 0  3BV 201 N
77 1.39 1.49 154.3 -2.07 -0.34 22.3 82 13 6 10 7 9 1 0  3BV 301 H MES 302 H 3BV 201 N
78 1.24 1.30 154.1 -1.20 -0.18 16.2 79 11 3 12 9 12 1 0  3BV 301 H MES 302 H 3BV 201 N
79 1.26 1.88 154.6 -1.95 -0.34 20.9 83 12 7 13 5 8 1 0  3BV 201 N
80 1.40 1.50 155.2 -1.86 -0.30 21.8 81 13 9 12 7 12 0 0  3BV 301 H MES 302 H 3BV 201 N
81 1.26 2.08 154.6 -1.83 -0.34 18.3 82 10 6 14 8 8 1 0  3BV 201 b
82 1.41 1.50 158.2 -1.81 -0.27 18.3 81 10 4 12 7 11 0 0  3BV 301 H MES 302 H 3BV 201 N
83 1.27 1.92 157.1 -1.24 -0.21 14.4 79 12 2 12 9 7 2 0  3BV 201 b
84 1.42 1.50 158.4 -1.50 -0.22 16.6 80 14 5 12 9 13 0 1  3BV 301 H MES 302 H 3BV 201 N
85 1.34 1.53 158.9 -1.92 -0.28 19.7 84 13 3 14 6 10 0 0  3BV 301 H MES 302 H 3BV 201 N
86 1.40 1.50 162.3 -1.88 -0.34 19.0 82 12 7 13 6 10 0 0  3BV 301 H MES 302 H 3BV 201 N
87 1.39 1.49 160.5 -1.73 -0.22 17.8 83 13 5 14 8 10 0 0  3BV 301 H MES 302 H 3BV 201 N
88 1.40 1.49 162.8 -1.71 -0.28 19.0 83 13 7 13 8 11 0 0  3BV 301 H MES 302 H 3BV 201 N
89 1.41 1.50 163.7 -1.93 -0.31 21.6 82 16 6 12 7 11 1 0  3BV 301 H MES 302 H 3BV 201 N
90 1.41 1.50 164.4 -2.01 -0.33 20.2 80 14 6 10 5 12 0 0  3BV 301 H MES 302 H 3BV 201 N
91 1.23 1.69 163.1 -1.36 -0.29 14.9 80 14 1 13 8 7 2 0  3BV 201 N
92 1.42 1.48 165.6 -1.92 -0.29 19.9 80 12 7 14 9 11 1 0  3BV 301 H MES 302 H 3BV 201 N
93 1.22 1.31 167.0 -1.27 -0.21 15.5 80 12 3 13 9 12 1 0  3BV 301 H MES 302 H 3BV 201 N
94 1.42 1.48 169.6 -1.93 -0.33 20.9 83 14 8 13 7 11 0 0  3BV 301 H MES 302 H 3BV 201 N
95 1.42 1.50 168.1 -1.44 -0.20 16.7 78 10 5 11 10 10 2 0  3BV 301 H MES 302 H 3BV 201 N
96 1.21 2.07 169.7 -1.79 -0.32 18.8 81 12 8 14 10 12 0 0  3BV 301 H MES 302 H 3BV 201 N
97 1.28 1.89 169.0 -1.35 -0.27 14.7 80 12 1 13 8 7 2 0  3BV 201 N
98 1.39 1.48 169.6 -1.34 -0.21 17.0 78 13 3 12 10 11 1 0  3BV 301 H MES 302 H 3BV 201 N
99 1.24 1.35 172.2 -1.34 -0.22 15.7 79 14 4 12 11 11 1 0  3BV 301 H MES 302 H 3BV 201 N
100 1.14 1.86 22.4 -0.73 -0.12 3.6 77 1 1 3 1 2 2 0  
101 1.37 1.37 19.5 -0.53 -0.60 5.7 82 0 1 1 1 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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