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PDBsum entry 4qu7

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Top Page protein dna_rna Protein-protein interface(s) tunnels links
Tunnel analysis for: 4qu7 calculated with MOLE 2.0 PDB id
4qu7
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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5 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.22 1.31 16.7 -1.65 -0.30 27.9 84 2 3 0 2 2 0 0  
2 1.31 1.32 34.3 -1.83 -0.50 28.2 88 3 4 1 2 1 0 0  DG 804 V DA 805 V
3 1.31 1.32 39.2 -0.89 -0.21 23.4 84 2 4 0 6 1 0 0  DA 805 V
4 1.29 1.43 17.4 0.27 -0.09 2.2 86 0 0 1 2 1 0 0  
5 1.36 1.82 18.4 0.07 -0.10 2.2 84 0 0 2 3 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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