PDBsum entry 4q5c Go to PDB code:  Tunnel analysis for: 4q5c calculated with MOLE 2.0 PDB id 4q5c Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   7 tunnels, coloured by tunnel radius 25 tunnels, coloured by tunnel radius 25 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.38 1.54 32.3 0.59 0.36 10.8 79 6 0 1 6 0 0 3  HEC 602 B HEC 603 B HEC 607 B 2 1.36 1.69 34.5 -1.11 -0.10 21.2 75 6 1 0 5 1 2 1  HEC 601 B HEC 603 B 3 1.34 1.69 38.7 -0.85 0.12 16.9 74 7 0 2 4 3 2 3  HEC 601 B HEC 603 B SO3 610 B 4 1.16 1.15 39.5 -1.26 -0.09 19.2 80 7 2 3 5 3 1 1  HEC 603 A HEC 604 A 5 1.16 1.16 39.3 -0.06 0.19 10.2 76 3 1 3 6 4 1 2  HEC 604 B 6 1.15 1.15 39.8 -1.16 -0.09 18.6 82 7 2 3 4 3 1 1  HEC 603 A HEC 604 A 7 1.13 1.13 40.1 0.04 0.22 9.2 76 3 1 3 6 4 1 2  HEC 604 A 8 1.13 1.13 40.4 -0.11 0.16 10.7 79 3 2 3 5 4 1 2  HEC 604 A 9 1.38 1.54 41.9 -1.37 -0.17 22.7 83 7 1 3 3 0 1 2  HEC 603 B HEC 604 B 10 1.16 1.13 45.3 0.11 0.29 11.9 72 5 2 2 6 4 1 4  HEC 604 A HEC 605 A 11 1.15 1.13 45.5 0.18 0.29 11.7 74 5 2 2 5 4 1 4  HEC 604 A HEC 605 A 12 1.18 1.17 48.1 -1.36 -0.09 21.0 81 7 2 3 5 3 1 1  HEC 603 B HEC 604 B 13 1.20 1.17 51.0 0.08 0.35 13.4 77 8 1 2 9 3 0 3  HEC 602 B HEC 603 B HEC 604 B HEC 607 B 14 1.15 1.15 55.0 -0.14 0.29 15.1 77 9 1 2 9 3 0 3  HEC 602 A HEC 603 A HEC 604 A HEC 607 A ACT 616 A 15 1.14 1.14 55.3 -0.08 0.30 14.4 78 9 1 2 8 3 0 3  HEC 602 A HEC 603 A HEC 604 A HEC 607 A ACT 616 A 16 1.16 1.14 59.3 -1.17 0.02 20.4 77 8 2 2 8 4 2 1  HEC 601 A HEC 603 A HEC 604 A 17 1.16 1.16 59.6 -1.09 0.03 19.5 79 8 2 2 7 4 2 1  HEC 601 A HEC 603 A HEC 604 A 18 1.19 1.27 59.8 -1.24 0.00 20.9 77 8 2 2 8 4 2 1  HEC 601 B HEC 603 B HEC 604 B 19 1.17 1.16 64.0 -1.06 0.11 18.1 76 9 1 4 7 6 2 3  HEC 601 B HEC 603 B HEC 604 B SO3 610 B 20 1.15 1.13 64.8 -1.10 0.09 18.2 76 10 1 4 7 6 2 3  HEC 601 A HEC 603 A HEC 604 A SO3 609 A 21 1.16 1.14 65.3 -1.11 0.09 17.8 77 9 1 4 6 6 2 3  HEC 601 A HEC 603 A HEC 604 A SO3 609 A 22 1.39 1.55 66.2 -0.07 0.25 16.5 77 12 2 2 9 1 2 6  HEC 602 B HEC 603 B HEC 606 B HEC 607 B HEC 608 B 23 1.23 1.18 83.9 -0.29 0.27 16.0 77 13 1 5 9 5 1 6  HEC 602 A HEC 603 A HEC 604 A HEC 606 A HEC 607 A HEC 608 A SO3 612 A 24 1.24 1.28 85.1 -0.24 0.29 17.2 76 14 3 3 12 4 2 6  HEC 602 B HEC 603 B HEC 604 B HEC 606 B HEC 607 B HEC 608 B 25 1.19 1.26 89.8 -0.17 0.31 16.3 76 14 2 3 12 4 2 6  HEC 602 A HEC 603 A HEC 604 A HEC 606 A HEC 607 A HEC 608 A Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.