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PDBsum entry 4py5

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Top Page protein dna_rna ligands metals pores links
Pore analysis for: 4py5 calculated with MOLE 2.0 PDB id
4py5
Pores calculated on whole structure Pores calculated excluding ligands

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1 pore, coloured by radius 1 pore, coloured by radius 1 pore, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 3.08 3.07 31.0 -1.52 -0.71 17.1 87 2 0 1 0 0 0 0  U 4 B G 5 B C 6 B A 8 B C 9 B A 10 B C 11 B C 12
B U 13 B DA 4 C DT 5 C DC 6 C DA 7 C DG 9 C DT 10
C

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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