spacer
spacer

PDBsum entry 4pl2

Go to PDB code: 
Top Page protein ligands pores links
Pore analysis for: 4pl2 calculated with MOLE 2.0 PDB id
4pl2
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 pores, coloured by radius 4 pores, coloured by radius 4 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.75 3.21 35.7 -0.49 0.07 13.3 75 5 1 4 3 3 1 0  
2 2.19 2.37 50.1 -1.45 -0.29 19.9 84 5 5 5 7 2 1 0  
3 2.89 2.89 68.8 -0.87 -0.22 13.9 80 5 3 8 5 3 1 0  
4 2.78 4.05 69.2 -1.47 -0.42 18.3 79 4 4 4 5 2 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer