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PDBsum entry 4pjm

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Pore analysis for: 4pjm calculated with MOLE 2.0 PDB id
4pjm
Pores calculated on whole structure Pores calculated excluding ligands

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4 pores, coloured by radius 7 pores, coloured by radius 7 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.61 2.69 40.0 -1.54 -0.54 14.6 86 3 4 6 3 2 1 0  PO4 801 A MG 802 A ADP 803 A
2 1.76 2.30 40.9 -1.69 -0.47 24.2 84 7 4 3 4 0 0 0  GOL 812 A
3 1.50 1.74 54.4 -1.18 -0.37 15.3 87 5 6 6 6 1 1 0  PO4 801 A MG 802 A ADP 803 A
4 2.29 3.34 80.5 -1.19 -0.19 21.3 81 6 5 5 5 2 1 0  GOL 812 A
5 1.67 2.00 80.9 -0.61 -0.09 15.8 86 3 4 5 7 0 1 0  GOL 812 A
6 2.04 2.26 85.1 -1.42 -0.25 24.6 81 9 8 5 4 2 0 0  
7 1.58 3.09 90.3 -1.63 -0.48 16.8 87 6 8 12 5 2 2 0  PO4 801 A MG 802 A ADP 803 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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