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PDBsum entry 4pi2

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 4pi2 calculated with MOLE 2.0 PDB id
4pi2
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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17 tunnels, coloured by tunnel radius 17 tunnels, coloured by tunnel radius 17 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.16 2.33 59.2 -1.58 -0.39 16.6 77 6 5 6 2 5 4 0  
2 1.23 1.31 86.0 -1.15 0.06 14.1 69 6 6 8 3 13 2 0  
3 1.23 1.32 87.2 -1.92 -0.15 20.3 79 9 9 10 3 6 2 0  
4 1.29 1.37 23.0 1.23 0.09 5.3 85 0 2 1 6 1 0 0  UNK 10 H UNK 13 H UNK 14 H UNK 18 H
5 1.64 1.71 25.5 0.79 0.04 9.0 87 0 2 1 8 1 0 0  UNK 7 H UNK 10 H UNK 13 H UNK 14 H UNK 18 H
6 1.29 1.37 30.5 0.81 0.51 6.1 77 2 2 1 7 3 0 0  UNK 10 H UNK 13 H UNK 14 H UNK 17 H UNK 21 H UNK
22 H
7 1.64 1.71 33.1 0.66 0.40 8.6 77 2 2 1 9 4 0 0  UNK 7 H UNK 10 H UNK 13 H UNK 14 H UNK 17 H UNK
21 H UNK 22 H
8 1.29 1.38 34.2 0.86 0.20 7.0 83 1 3 1 8 2 0 0  UNK 10 H UNK 13 H UNK 14 H UNK 16 H UNK 17 H UNK
20 H UNK 21 H UNK 22 H
9 1.64 1.72 36.8 0.61 0.14 9.8 84 1 3 1 9 2 0 0  UNK 7 H UNK 10 H UNK 13 H UNK 14 H UNK 16 H UNK
17 H UNK 20 H UNK 21 H UNK 22 H
10 1.22 1.41 20.7 0.30 0.03 6.6 79 1 1 2 4 2 2 0  
11 1.13 2.97 22.3 0.45 0.25 9.6 75 1 1 1 4 2 1 0  
12 1.23 1.41 23.4 -0.08 0.11 6.0 76 1 0 2 4 4 2 0  
13 1.26 1.30 21.3 -0.66 -0.20 9.3 78 2 1 2 2 1 1 0  
14 1.24 1.31 22.1 -0.72 -0.27 8.3 80 2 1 2 3 1 1 0  
15 1.17 1.16 30.9 -0.36 -0.37 7.9 88 1 1 4 3 1 2 0  
16 1.16 1.16 31.8 -0.45 -0.40 7.1 89 1 1 4 4 1 2 0  
17 1.20 1.40 26.9 1.60 0.65 4.7 85 1 1 1 11 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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