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PDBsum entry 4php
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Tunnel analysis for: 4php calculated with  MOLE 2.0
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PDB id
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4php
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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2 tunnels,
coloured by tunnel radius |
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5 tunnels,
coloured by
tunnel radius
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5 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.33 |
1.39 |
26.3 |
-0.98 |
0.08 |
17.8 |
86 |
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3 |
1 |
2 |
1 |
1 |
0 |
0 |
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XG4 405 A DT 6 P DC 10 P DC 5 T DT 6 T DG 7 T DC
8 T
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2 |
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1.32 |
1.38 |
32.5 |
-2.59 |
-0.75 |
26.0 |
86 |
2 |
5 |
2 |
0 |
1 |
0 |
0 |
MN 401 A XG4 405 A DC 10 P DT 6 T DG 7 T
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3 |
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1.36 |
1.43 |
33.4 |
-2.24 |
-0.66 |
25.9 |
91 |
3 |
5 |
2 |
2 |
1 |
0 |
0 |
MN 401 A XG4 405 A DC 10 P DT 6 T DG 7 T
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4 |
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1.31 |
1.37 |
39.9 |
0.13 |
0.26 |
8.9 |
86 |
2 |
1 |
2 |
1 |
1 |
0 |
0 |
XG4 405 A DT 6 P DG 7 P DC 8 P DG 9 P DC 10 P DT
6 T DG 7 T DC 8 T
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5 |
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2.24 |
2.24 |
17.5 |
-0.40 |
-0.80 |
3.4 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
0 |
DT 3 P DG 4 P DA 5 P DA 14 T DG 15 T DC 16 T
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program