 |
PDBsum entry 4p75
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Pore analysis for: 4p75 calculated with MOLE 2.0
|
PDB id
|
|
|
|
4p75
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Pores calculated on whole structure |
 |
Pores calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
16 pores,
coloured by radius |
 |
13 pores,
coloured by radius
|
13 pores,
coloured as in list below
|
|
|
 |
 |
 |
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
2.26 |
2.48 |
26.1 |
-1.03 |
-0.45 |
14.0 |
75 |
 |
2 |
4 |
2 |
3 |
1 |
3 |
0 |
 |
|
 |
 |
2 |
 |
1.76 |
3.28 |
35.2 |
-2.45 |
-0.22 |
32.9 |
79 |
6 |
5 |
0 |
1 |
1 |
3 |
0 |
|
 |
3 |
 |
1.18 |
1.42 |
46.3 |
-0.61 |
-0.12 |
14.8 |
84 |
5 |
2 |
4 |
4 |
2 |
2 |
0 |
|
 |
4 |
 |
1.35 |
3.11 |
47.4 |
-1.84 |
-0.19 |
24.1 |
81 |
5 |
4 |
3 |
3 |
2 |
3 |
0 |
|
 |
5 |
 |
1.18 |
1.40 |
51.9 |
-1.34 |
-0.23 |
24.5 |
82 |
8 |
5 |
2 |
4 |
2 |
1 |
0 |
|
 |
6 |
 |
1.68 |
1.87 |
64.8 |
-2.00 |
-0.43 |
28.4 |
86 |
5 |
8 |
2 |
3 |
0 |
2 |
0 |
|
 |
7 |
 |
1.92 |
1.94 |
79.3 |
-1.24 |
-0.38 |
16.9 |
84 |
10 |
4 |
7 |
10 |
0 |
2 |
0 |
|
 |
8 |
 |
1.74 |
1.79 |
112.4 |
-2.17 |
-0.53 |
25.8 |
83 |
5 |
7 |
7 |
4 |
2 |
2 |
0 |
|
 |
9 |
 |
1.36 |
1.58 |
119.2 |
-0.95 |
-0.30 |
17.4 |
84 |
13 |
4 |
8 |
13 |
2 |
1 |
0 |
|
 |
10 |
 |
1.24 |
1.30 |
130.9 |
-1.23 |
-0.34 |
18.5 |
83 |
16 |
6 |
7 |
12 |
2 |
2 |
0 |
|
 |
11 |
 |
1.69 |
1.83 |
152.5 |
-1.19 |
-0.40 |
15.9 |
84 |
9 |
8 |
6 |
13 |
0 |
4 |
0 |
|
 |
12 |
 |
1.38 |
1.55 |
175.2 |
-1.22 |
-0.34 |
17.1 |
84 |
10 |
9 |
7 |
8 |
2 |
4 |
0 |
|
 |
13 |
 |
1.27 |
1.41 |
276.0 |
-2.08 |
-0.55 |
26.4 |
83 |
16 |
25 |
8 |
6 |
2 |
4 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |