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PDBsum entry 4p5t
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Tunnel analysis for: 4p5t calculated with  MOLE 2.0
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PDB id
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4p5t
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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19 tunnels,
coloured by tunnel radius |
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19 tunnels,
coloured by
tunnel radius
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19 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.27 |
1.45 |
21.4 |
-0.18 |
-0.26 |
15.7 |
80 |
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2 |
3 |
0 |
5 |
1 |
0 |
0 |
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2 |
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1.25 |
1.44 |
24.9 |
0.27 |
-0.04 |
9.7 |
76 |
2 |
1 |
0 |
5 |
2 |
1 |
0 |
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3 |
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1.26 |
1.45 |
36.8 |
0.13 |
-0.17 |
4.8 |
82 |
1 |
1 |
2 |
7 |
1 |
2 |
0 |
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4 |
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1.24 |
1.43 |
38.9 |
-0.44 |
-0.30 |
8.4 |
83 |
3 |
1 |
2 |
6 |
2 |
1 |
0 |
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5 |
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1.23 |
1.44 |
39.7 |
0.11 |
-0.15 |
6.1 |
79 |
2 |
1 |
2 |
6 |
2 |
2 |
0 |
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6 |
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1.23 |
1.45 |
21.4 |
0.16 |
-0.26 |
10.9 |
80 |
1 |
3 |
0 |
5 |
1 |
0 |
0 |
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7 |
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1.24 |
1.45 |
23.2 |
0.62 |
-0.07 |
6.9 |
78 |
1 |
1 |
0 |
5 |
2 |
0 |
0 |
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8 |
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1.25 |
1.45 |
33.3 |
-0.13 |
-0.27 |
4.4 |
82 |
1 |
1 |
3 |
7 |
1 |
2 |
0 |
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9 |
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1.24 |
1.45 |
33.5 |
-0.08 |
-0.27 |
8.9 |
84 |
2 |
1 |
2 |
6 |
2 |
0 |
0 |
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10 |
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1.11 |
1.40 |
28.7 |
0.59 |
0.14 |
8.5 |
79 |
1 |
3 |
1 |
4 |
3 |
1 |
0 |
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11 |
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1.29 |
1.58 |
15.8 |
-1.65 |
-0.59 |
20.5 |
87 |
4 |
3 |
2 |
1 |
0 |
0 |
0 |
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12 |
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1.19 |
2.35 |
20.4 |
-1.93 |
-0.67 |
22.6 |
87 |
6 |
3 |
2 |
1 |
0 |
0 |
0 |
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13 |
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1.15 |
1.15 |
25.9 |
0.22 |
0.09 |
8.4 |
79 |
1 |
3 |
1 |
4 |
3 |
1 |
0 |
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14 |
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1.16 |
1.14 |
27.8 |
-0.10 |
0.00 |
11.1 |
77 |
1 |
4 |
1 |
4 |
4 |
1 |
0 |
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15 |
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1.71 |
2.69 |
17.1 |
0.36 |
-0.14 |
1.5 |
87 |
0 |
0 |
3 |
4 |
0 |
1 |
0 |
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16 |
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1.51 |
1.52 |
16.2 |
-0.70 |
0.05 |
21.6 |
73 |
2 |
2 |
1 |
1 |
2 |
0 |
0 |
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17 |
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1.51 |
1.52 |
17.3 |
0.33 |
0.18 |
10.9 |
78 |
2 |
1 |
1 |
2 |
2 |
0 |
0 |
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18 |
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1.21 |
1.33 |
15.0 |
1.01 |
0.16 |
1.9 |
90 |
0 |
0 |
2 |
4 |
2 |
0 |
0 |
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19 |
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1.23 |
2.77 |
15.1 |
1.53 |
0.40 |
1.3 |
86 |
0 |
0 |
2 |
4 |
3 |
0 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program