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PDBsum entry 4osm
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Pore analysis for: 4osm calculated with MOLE 2.0
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PDB id
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4osm
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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4 pores,
coloured by radius |
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4 pores,
coloured by radius
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4 pores,
coloured as in list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.69 |
1.69 |
74.5 |
-2.28 |
-0.71 |
17.0 |
92 |
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5 |
3 |
9 |
2 |
0 |
0 |
0 |
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DT 10 G DA -14 H DG -13 H DA -12 H DG -11 H DA - 10 H DG -9 H DA -8 H DT -7 H DA -6 H DA -5 H DA - 4 H
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2 |
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1.27 |
1.41 |
77.0 |
0.01 |
-0.27 |
6.5 |
78 |
2 |
2 |
4 |
10 |
0 |
1 |
1 |
DT 12 I DC 13 I DT 14 I DA -14 J DG -11 J DA -10 J
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3 |
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1.71 |
1.71 |
77.5 |
-2.40 |
-0.72 |
25.9 |
81 |
10 |
6 |
5 |
2 |
0 |
0 |
0 |
DG -1 I DT 0 I DA -6 J DA -5 J DA -4 J DG - 3 J DG -2 J
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4 |
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1.64 |
1.65 |
88.7 |
-1.94 |
-0.81 |
8.9 |
90 |
5 |
2 |
11 |
2 |
0 |
0 |
0 |
DA -10 H DG -9 H DA -8 H DT -7 H DA -6 H DA - 5 H DA -4 H DC 13 I DT 14 I DG -11 J DA -10 J DG - 9 J
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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