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PDBsum entry 4ont

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 4ont calculated with MOLE 2.0 PDB id
4ont
Pores calculated on whole structure Pores calculated excluding ligands

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5 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.82 1.84 31.3 -0.30 -0.14 13.5 89 5 2 3 5 1 1 1  GOL 402 B
2 1.86 1.89 49.4 -0.61 -0.23 14.2 82 8 2 5 6 2 3 1  GOL 402 B
3 1.60 1.89 77.9 -1.15 -0.27 20.5 76 7 6 5 7 4 1 0  GAL 2 H SIA 3 H
4 1.61 1.89 80.2 -1.51 -0.27 22.6 78 9 6 4 9 3 1 0  GAL 2 H SIA 3 H
5 1.63 1.91 82.9 -1.42 -0.45 21.5 81 11 7 4 9 3 0 0  GAL 2 H SIA 3 H
6 1.66 1.80 90.7 -2.22 -0.45 27.4 79 11 8 4 7 1 2 1  GOL 402 B
7 1.65 1.82 93.4 -2.00 -0.59 25.7 82 13 9 4 6 1 1 1  GOL 402 B
8 1.49 1.62 96.4 -2.17 -0.50 18.9 80 3 3 7 1 2 1 0  GOL 403 B
9 2.08 2.39 102.3 -2.04 -0.45 24.5 74 8 8 4 5 3 2 0  
10 2.17 2.33 105.0 -1.86 -0.61 23.3 77 10 9 4 4 3 1 0  
11 2.11 2.39 112.0 -2.19 -0.46 25.8 76 10 8 5 5 2 2 0  
12 2.12 2.35 114.7 -1.96 -0.61 24.0 78 13 9 5 4 2 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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