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PDBsum entry 4omj

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 4omj calculated with MOLE 2.0 PDB id
4omj
Pores calculated on whole structure Pores calculated excluding ligands

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3 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.17 1.36 55.8 -2.41 -0.57 29.4 86 6 5 2 2 1 0 0  SO4 303 B
2 1.37 1.45 25.9 -0.04 0.16 6.8 67 2 2 1 4 3 3 0  CL 308 A
3 1.35 1.43 33.2 0.36 0.16 5.1 69 4 0 2 4 2 2 0  CL 308 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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