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PDBsum entry 4omc

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Pore analysis for: 4omc calculated with MOLE 2.0 PDB id
4omc
Pores calculated on whole structure Pores calculated excluding ligands

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12 pores, coloured by radius 22 pores, coloured by radius 22 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.89 2.04 30.7 -2.93 -0.36 34.8 88 7 2 2 1 0 1 0  
2 1.13 1.78 38.5 -1.85 -0.74 22.7 87 2 6 1 1 0 1 0  00S 5 N
3 1.87 2.06 38.6 -2.23 -0.49 26.8 87 7 4 1 2 0 1 0  
4 1.96 2.17 39.2 -2.21 -0.50 24.9 91 5 3 4 3 0 0 0  
5 1.91 2.11 45.6 -2.30 -0.60 25.7 86 7 3 3 1 0 0 0  
6 1.19 1.81 47.6 -1.86 -0.80 20.1 90 1 7 3 1 0 1 0  FMT 604 B 2UC 1 I 00S 5 I
7 1.73 2.25 50.4 -3.06 -0.43 35.0 88 10 3 3 2 0 1 0  
8 1.75 2.23 50.8 -2.41 -0.49 31.1 88 8 4 2 1 0 1 0  
9 2.15 2.46 53.2 -1.66 -0.62 18.9 89 3 2 5 3 0 2 0  
10 1.93 3.13 55.9 -1.89 -0.56 21.6 90 5 2 6 4 0 2 0  
11 1.19 1.19 57.6 -2.53 -0.64 26.1 91 8 4 5 1 0 2 0  00S 5 N
12 1.24 1.24 58.0 -2.07 -0.70 23.1 91 6 5 4 0 0 2 0  00S 5 N
13 1.22 1.69 93.4 -1.94 -0.80 21.1 90 1 11 4 1 0 2 0  FMT 604 D 2UC 1 J 00S 5 J 2UC 1 K 00S 5 K
14 1.47 2.99 136.3 -2.18 -0.38 20.4 82 14 9 12 5 5 3 0  FMT 601 B FMT 602 B FMT 604 B
15 1.17 1.43 145.3 -1.49 -0.41 15.1 80 6 1 4 3 1 5 0  
16 1.31 3.01 166.8 -1.79 -0.32 16.8 80 14 6 13 6 7 3 0  FMT 601 B FMT 602 B FMT 604 B
17 1.18 1.27 164.0 -2.00 -0.53 19.7 81 14 14 10 4 6 3 0  FMT 603 A FMT 604 A 2UC 1 H 00S 5 H
18 1.39 3.44 262.9 -2.02 -0.55 19.2 86 18 16 15 7 5 2 0  FMT 602 C FMT 603 C FMT 604 C FMT 604 D 2UC 1 K
00S 5 K
19 1.22 1.95 279.6 -1.84 -0.47 16.2 84 15 15 21 9 10 4 0  FMT 601 B FMT 602 B FMT 604 B FMT 602 C FMT 603 C
FMT 604 C FMT 604 D 2UC 1 K 00S 5 K
20 1.19 1.21 330.5 -1.80 -0.54 16.6 83 15 20 22 9 11 5 0  FMT 603 A FMT 604 A FMT 602 C FMT 603 C FMT 604 C
FMT 604 D 2UC 1 H 00S 5 H 2UC 1 K 00S 5 K
21 1.26 1.86 355.7 -1.65 -0.54 17.2 84 19 9 13 11 4 4 0  
22 1.23 1.69 426.0 -1.66 -0.52 16.1 82 23 12 19 12 11 6 0  FMT 601 A FMT 603 A FMT 604 A 2UC 1 H 00S 5 H

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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