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PDBsum entry 4om0
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Tunnel analysis for: 4om0 calculated with  MOLE 2.0
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PDB id
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4om0
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Tunnels calculated on whole structure |
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Tunnels calculated excluding ligands
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17 tunnels,
coloured by tunnel radius |
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21 tunnels,
coloured by
tunnel radius
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21 tunnels,
coloured as in
list below
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Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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1.44 |
1.44 |
38.9 |
-1.59 |
-0.55 |
15.4 |
91 |
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4 |
1 |
4 |
4 |
1 |
1 |
0 |
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2 |
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1.43 |
1.43 |
39.3 |
-2.14 |
-0.58 |
22.5 |
82 |
7 |
5 |
4 |
1 |
3 |
1 |
0 |
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3 |
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1.29 |
1.37 |
24.1 |
0.00 |
0.21 |
8.2 |
70 |
2 |
1 |
2 |
3 |
3 |
2 |
1 |
NAG 503 G
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4 |
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1.23 |
1.24 |
16.3 |
-1.44 |
-0.28 |
19.1 |
78 |
2 |
2 |
4 |
1 |
3 |
0 |
0 |
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5 |
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1.24 |
1.24 |
16.8 |
-1.37 |
-0.22 |
17.0 |
80 |
2 |
2 |
5 |
1 |
3 |
0 |
0 |
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6 |
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1.24 |
1.24 |
18.2 |
-2.10 |
-0.59 |
17.0 |
73 |
2 |
2 |
3 |
0 |
4 |
0 |
0 |
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7 |
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1.26 |
1.26 |
18.6 |
-2.01 |
-0.51 |
15.5 |
76 |
2 |
2 |
4 |
0 |
4 |
0 |
0 |
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8 |
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1.22 |
1.22 |
15.5 |
-1.10 |
-0.50 |
14.3 |
72 |
2 |
3 |
2 |
2 |
1 |
1 |
0 |
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9 |
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1.23 |
1.23 |
19.2 |
-0.24 |
-0.39 |
6.4 |
75 |
1 |
0 |
3 |
3 |
2 |
1 |
0 |
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10 |
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1.22 |
1.22 |
22.3 |
-0.67 |
-0.43 |
12.0 |
73 |
3 |
1 |
2 |
3 |
1 |
1 |
0 |
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11 |
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1.13 |
1.28 |
22.5 |
-0.31 |
-0.39 |
9.3 |
67 |
1 |
0 |
2 |
3 |
1 |
1 |
2 |
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12 |
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1.55 |
1.65 |
16.9 |
-0.20 |
-0.56 |
2.2 |
96 |
0 |
0 |
5 |
2 |
1 |
0 |
0 |
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13 |
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1.35 |
3.01 |
21.5 |
-0.61 |
-0.62 |
4.0 |
96 |
1 |
0 |
7 |
2 |
1 |
0 |
0 |
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14 |
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1.24 |
1.39 |
15.1 |
-0.65 |
0.04 |
11.9 |
72 |
1 |
1 |
0 |
3 |
2 |
0 |
0 |
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15 |
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1.24 |
1.39 |
15.7 |
-1.19 |
-0.19 |
16.0 |
72 |
1 |
1 |
1 |
3 |
2 |
1 |
0 |
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16 |
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1.45 |
1.79 |
16.2 |
-0.69 |
-0.10 |
11.2 |
68 |
1 |
1 |
1 |
2 |
2 |
1 |
0 |
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17 |
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1.28 |
1.63 |
17.6 |
-0.54 |
-0.05 |
10.2 |
71 |
1 |
1 |
0 |
3 |
2 |
1 |
0 |
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18 |
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1.44 |
1.79 |
18.2 |
-0.73 |
-0.16 |
11.1 |
71 |
1 |
1 |
1 |
3 |
2 |
2 |
0 |
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19 |
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1.51 |
1.62 |
20.1 |
-0.70 |
-0.14 |
14.4 |
79 |
2 |
1 |
2 |
3 |
2 |
0 |
0 |
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20 |
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1.31 |
1.60 |
21.5 |
-0.46 |
-0.03 |
13.2 |
81 |
2 |
1 |
1 |
4 |
2 |
0 |
0 |
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21 |
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1.51 |
1.62 |
22.0 |
-0.68 |
-0.15 |
14.6 |
79 |
2 |
1 |
2 |
4 |
2 |
1 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program