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PDBsum entry 4o8i

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Isomerase PDB id
4o8i
Contents
Protein chain
164 a.a.
Ligands
1PE
Waters ×133

References listed in PDB file
Key reference
Title High-Resolution crystal structures of two crystal forms of human cyclophilin d in complex with peg 400 molecules.
Authors K.R.Valasani, E.A.Carlson, K.P.Battaile, A.Bisson, C.Wang, S.Lovell, S.Shidu yan.
Ref. Acta Crystallogr F Struct Biol Commun, 2014, 70, 717-722. [DOI no: 10.1107/S2053230X14009480]
PubMed id 24915078
Abstract
Cyclophilin D (CypD) is a key mitochondrial target for amyloid-β-induced mitochondrial and synaptic dysfunction and is considered a potential drug target for Alzheimer's disease. The high-resolution crystal structures of primitive orthorhombic (CypD-o) and primitive tetragonal (CypD-t) forms have been determined to 1.45 and 0.85 Å resolution, respectively, and are nearly identical structurally. Although an isomorphous structure of CypD-t has previously been reported, the structure reported here was determined at atomic resolution, while CypD-o represents a new crystal form for this protein. In addition, each crystal form contains a PEG 400 molecule bound to the same region along with a second PEG 400 site in CypD-t which occupies the cyclosporine A inhibitor binding site of CypD. Highly precise structural information for CypD should be extremely useful for discerning the detailed interaction of small molecules, particularly drugs and/or inhibitors, bound to CypD. The 0.85 Å resolution structure of CypD-t is the highest to date for any CypD structure.
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