PDBsum entry 4o6h

Pore analysis for: 4o6h calculated with

MOLE 2.0

PDB id

4o6h

Pores calculated on whole structure

Pores calculated excluding ligands

View options

MOLEonline 2.0 manipulation
and
visualization
with HETATM:

without HETATM:

16 pores, coloured by radius

16 pores, coloured by radius

16 pores, coloured as in
list below

Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.

Pores

Free R

Length

HPathy

HPhob

Polar

Rel Mut

Residue..type

Ligands

Radius

1

1.24

1.23

40.9

-1.38

-0.56

22.9

88

3

6

1

3

0

0

0

2

1.81

1.96

46.4

-0.99

-0.25

13.6

76

5

3

2

4

4

2

0

3

1.98

1.97

52.3

-0.67

-0.67

3.8

96

2

1

9

3

0

2

0

4

1.80

1.80

58.4

-0.65

-0.34

10.0

93

2

2

6

4

0

1

0

5

1.46

1.47

71.8

-2.36

-0.76

22.7

83

5

4

4

0

0

1

0

6

3.80

4.07

30.7

-1.90

-0.54

12.7

75

2

2

3

1

3

1

0

7

1.97

1.99

33.6

0.34

-0.04

9.3

94

3

1

4

7

0

1

0

8

1.66

1.79

40.6

-1.52

-0.07

20.8

75

6

2

1

3

4

2

0

9

3.22

3.39

43.3

-2.24

-0.55

12.1

81

3

1

5

1

2

1

0

10

1.86

1.86

53.0

-0.91

-0.49

11.0

93

4

1

8

4

0

2

0

11

1.93

1.94

53.9

-0.53

-0.62

3.2

97

1

0

13

4

1

1

0

12

1.96

1.98

80.5

-0.51

-0.28

15.6

89

6

6

5

8

1

1

0

13

1.86

1.81

81.6

-0.46

-0.24

15.2

90

5

4

5

11

2

1

0

14

2.43

2.66

92.7

-2.37

-0.60

18.1

81

7

3

6

3

2

1

0

15

1.53

1.74

98.2

-0.98

-0.30

15.4

88

8

5

8

9

2

3

0

16

2.05

2.27

31.5

-0.77

-0.36

13.1

87

1

1

4

3

0

2

0

Residue-type_colouring

Positive	Negative	Neutral	Aliphatic	Aromatic	Pro & Gly	Cysteine
H,K,R	D,E	S,T,N,Q	A,V,L,I,M	F,Y,W	P,G	C

Acknowledgement

Pores were calculated by

MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.