PDBsum entry 4o4j Go to PDB code:  Pore analysis for: 4o4j calculated with MOLE 2.0 PDB id 4o4j Pores calculated on whole structure Pores calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   9 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in list below Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. Pores Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.52 5.13 31.5 -1.88 -0.23 27.4 73 5 5 0 1 2 1 0   2 2.14 2.27 33.2 -1.66 -0.57 16.9 84 4 2 4 2 0 1 0   3 2.38 2.43 88.7 -1.10 -0.43 12.6 84 4 5 6 5 3 2 0   4 1.24 1.24 96.6 -1.94 -0.57 20.9 88 2 6 8 3 3 1 0   5 1.24 1.24 170.5 -1.39 -0.43 14.2 84 8 4 11 7 5 4 0   6 1.19 1.73 44.6 -1.89 -0.51 20.1 80 7 3 3 2 0 3 0   7 0.89 0.89 238.7 -1.66 -0.43 21.5 85 20 10 16 14 1 2 1  ACP 401 F 8 1.26 1.36 35.5 -0.89 -0.49 9.5 87 1 2 7 3 1 1 1   Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.