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PDBsum entry 4o2d

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Pore analysis for: 4o2d calculated with MOLE 2.0 PDB id
4o2d
Pores calculated on whole structure Pores calculated excluding ligands

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7 pores, coloured by radius 6 pores, coloured by radius 6 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.75 1.78 67.3 -1.46 -0.75 15.9 84 2 8 4 3 0 3 0  
2 1.58 1.62 83.1 -1.79 -0.70 23.1 84 7 10 2 4 0 2 0  TRS 802 A
3 1.20 1.66 93.7 -1.44 -0.37 26.0 84 8 13 5 6 3 0 0  TRS 802 A
4 1.21 1.40 101.9 -1.19 -0.46 14.2 82 6 3 6 5 4 5 0  
5 1.18 1.94 104.0 -1.11 -0.41 16.5 84 6 7 5 5 3 3 0  
6 1.20 1.64 106.8 -1.39 -0.42 20.0 82 11 9 5 5 3 3 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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