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PDBsum entry 4o2b

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 4o2b calculated with MOLE 2.0 PDB id
4o2b
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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14 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.17 1.43 19.7 -1.45 -0.34 21.9 86 4 2 3 4 0 0 0  
2 1.18 1.43 24.3 -1.82 -0.32 21.4 83 3 2 3 3 1 0 0  
3 1.21 1.80 18.0 -0.05 0.26 9.9 81 2 0 3 3 2 0 0  
4 1.39 1.39 17.0 0.72 0.09 6.5 71 1 1 2 3 3 0 0  
5 1.34 1.98 15.8 0.21 0.04 9.2 73 1 1 1 3 3 2 0  
6 1.18 1.78 18.4 -1.96 -0.65 9.6 96 1 0 4 0 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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