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PDBsum entry 4nxk

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 4nxk calculated with MOLE 2.0 PDB id
4nxk
Pores calculated on whole structure Pores calculated excluding ligands

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20 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.91 2.98 36.0 -1.11 -0.09 11.5 75 2 2 2 2 2 0 0  SO4 506 C SO4 508 D
2 1.59 1.82 42.0 -2.53 -0.41 27.2 81 7 7 4 2 3 0 0  SO4 509 C
3 2.49 4.06 53.6 -2.95 -0.58 35.9 80 10 6 2 0 1 1 0  SO4 502 G
4 2.50 4.06 55.7 -2.59 -0.52 33.8 83 9 6 3 2 1 0 0  
5 1.58 1.79 56.4 -2.16 -0.45 24.0 76 7 4 4 2 1 1 0  SO4 502 G
6 1.54 1.82 63.8 -1.51 -0.27 17.8 80 6 2 3 3 2 0 0  GOL 512 E
7 2.52 2.88 71.2 -2.24 -0.60 20.2 84 4 5 5 2 1 3 0  SO4 507 C
8 1.96 2.56 74.7 -2.60 -0.39 31.9 78 11 9 3 3 3 2 0  SO4 503 A GOL 512 A
9 1.61 1.79 101.8 -1.25 0.05 15.0 74 7 2 6 5 4 1 0  SO4 505 G SO4 505 H
10 1.55 1.78 104.2 -1.53 -0.04 18.5 78 9 3 7 6 3 0 0  SO4 505 G SO4 505 H
11 1.92 2.55 251.6 -1.65 -0.35 16.9 77 18 11 18 9 6 5 0  SO4 507 C SO4 508 E SO4 505 G SO4 505 H
12 1.25 1.36 259.3 -1.60 -0.40 15.4 77 15 14 15 10 7 6 0  SO4 507 C SO4 502 E CIT 514 E SO4 505 G SO4 505 H

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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