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PDBsum entry 4nwm

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 4nwm calculated with MOLE 2.0 PDB id
4nwm
Pores calculated on whole structure Pores calculated excluding ligands

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5 pores, coloured by radius 10 pores, coloured by radius 10 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.63 1.74 34.5 -1.04 -0.23 17.2 86 5 4 4 4 1 0 0  OCS 481 B
2 2.73 3.09 35.4 -1.40 -0.52 16.4 83 3 3 2 4 1 0 0  OCS 481 A 2P5 701 A
3 1.23 1.23 36.5 0.12 -0.23 7.6 82 1 2 3 8 1 0 0  OCS 481 B 2P5 701 B
4 1.57 1.66 39.4 -2.26 -0.64 23.6 89 4 5 7 1 2 0 0  
5 2.38 3.09 40.2 -1.50 -0.58 18.9 82 4 5 2 4 0 0 0  OCS 481 A 2P5 701 A
6 2.70 3.09 42.4 -1.65 -0.52 18.3 82 4 3 3 3 1 0 0  OCS 481 A
7 1.58 1.66 45.2 -1.86 -0.46 26.5 78 5 8 3 4 2 0 0  
8 1.14 2.87 47.9 0.00 -0.01 15.1 81 4 3 2 13 3 0 0  OCS 481 A 2P5 701 A
9 1.15 2.89 55.5 -0.87 -0.27 18.9 84 4 5 5 11 3 0 0  2P5 701 A
10 1.24 1.24 55.3 -0.52 -0.41 11.2 86 3 3 6 8 1 0 0  2P5 701 A 2P5 701 B

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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