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PDBsum entry 4nqc

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 4nqc calculated with MOLE 2.0 PDB id
4nqc
Pores calculated on whole structure Pores calculated excluding ligands

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8 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.72 1.90 36.1 -1.74 -0.59 20.5 82 3 6 5 1 2 0 0  
2 2.09 3.19 42.0 -1.47 -0.09 13.0 71 5 3 4 1 5 5 0  
3 1.64 1.90 43.3 -1.24 -0.41 16.6 84 2 5 2 3 2 1 0  
4 1.63 1.63 44.0 -1.93 -0.61 25.0 80 4 6 3 1 2 0 0  
5 2.08 3.32 53.0 -1.44 -0.15 13.3 72 3 3 4 1 6 4 0  
6 1.58 1.58 26.0 -0.88 -0.24 13.2 70 2 3 2 4 3 0 0  
7 1.59 1.59 33.6 -1.03 -0.23 15.3 69 3 4 2 4 4 0 0  
8 3.05 3.08 32.2 -1.90 -0.69 19.0 76 3 2 1 0 1 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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