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PDBsum entry 4npy
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Pore analysis for: 4npy calculated with  MOLE 2.0
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PDB id
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4npy
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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27 pores,
coloured by radius |
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26 pores,
coloured by radius
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26 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.11 |
2.11 |
25.9 |
-2.05 |
-0.67 |
17.6 |
91 |
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2 |
0 |
3 |
2 |
0 |
0 |
0 |
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2 |
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2.04 |
2.12 |
26.4 |
0.25 |
-0.41 |
4.9 |
99 |
1 |
1 |
5 |
4 |
0 |
0 |
0 |
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3 |
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3.73 |
3.73 |
30.2 |
-0.93 |
-0.51 |
7.2 |
86 |
1 |
2 |
3 |
3 |
1 |
3 |
0 |
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4 |
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2.47 |
2.66 |
37.4 |
-1.37 |
-0.72 |
11.5 |
83 |
1 |
3 |
2 |
1 |
0 |
4 |
0 |
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5 |
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2.60 |
2.60 |
38.6 |
-0.85 |
-0.52 |
9.8 |
91 |
4 |
0 |
7 |
4 |
1 |
3 |
0 |
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6 |
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2.20 |
2.66 |
40.3 |
-2.20 |
-0.61 |
27.2 |
87 |
5 |
3 |
3 |
3 |
0 |
1 |
0 |
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7 |
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2.81 |
3.03 |
40.5 |
-0.99 |
-0.41 |
11.6 |
89 |
3 |
1 |
6 |
4 |
1 |
3 |
0 |
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8 |
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2.54 |
2.55 |
41.1 |
-1.68 |
-0.51 |
15.1 |
78 |
4 |
1 |
3 |
1 |
1 |
5 |
0 |
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9 |
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2.60 |
2.81 |
46.7 |
-0.78 |
-0.69 |
8.0 |
92 |
2 |
2 |
3 |
5 |
0 |
2 |
0 |
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10 |
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2.60 |
2.81 |
47.4 |
-0.74 |
-0.62 |
6.6 |
86 |
0 |
2 |
1 |
3 |
1 |
4 |
0 |
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11 |
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2.10 |
2.12 |
47.4 |
-1.66 |
-0.40 |
15.1 |
77 |
3 |
1 |
2 |
3 |
2 |
6 |
0 |
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12 |
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2.00 |
3.74 |
47.7 |
-1.41 |
-0.69 |
12.9 |
98 |
3 |
1 |
6 |
3 |
0 |
0 |
0 |
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13 |
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1.43 |
1.42 |
49.1 |
-1.54 |
-0.57 |
12.4 |
75 |
4 |
1 |
5 |
0 |
3 |
4 |
0 |
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14 |
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2.11 |
2.11 |
48.9 |
-1.09 |
-0.46 |
12.5 |
90 |
3 |
1 |
6 |
6 |
1 |
3 |
0 |
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15 |
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2.23 |
3.15 |
53.3 |
-1.60 |
-0.71 |
13.9 |
97 |
4 |
1 |
8 |
1 |
0 |
0 |
0 |
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16 |
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2.05 |
2.14 |
54.5 |
-0.13 |
-0.38 |
3.6 |
92 |
0 |
1 |
7 |
5 |
1 |
3 |
0 |
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17 |
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2.79 |
3.06 |
55.9 |
-0.08 |
-0.38 |
4.2 |
92 |
2 |
1 |
6 |
7 |
1 |
3 |
0 |
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18 |
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2.77 |
4.77 |
63.1 |
-0.66 |
-0.49 |
7.9 |
87 |
3 |
2 |
3 |
7 |
1 |
3 |
0 |
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19 |
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1.41 |
1.41 |
65.7 |
-1.04 |
-0.55 |
9.2 |
89 |
3 |
1 |
11 |
4 |
2 |
5 |
0 |
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20 |
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2.25 |
3.17 |
71.3 |
-1.55 |
-0.54 |
13.1 |
85 |
4 |
2 |
7 |
1 |
2 |
5 |
0 |
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21 |
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2.28 |
3.28 |
74.3 |
-1.14 |
-0.55 |
11.8 |
94 |
4 |
2 |
11 |
5 |
1 |
3 |
0 |
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22 |
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2.11 |
2.12 |
76.6 |
-1.02 |
-0.59 |
12.2 |
86 |
4 |
4 |
4 |
8 |
1 |
3 |
0 |
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23 |
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2.14 |
2.13 |
77.3 |
-1.01 |
-0.56 |
11.5 |
82 |
2 |
4 |
2 |
6 |
2 |
5 |
0 |
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24 |
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1.93 |
2.25 |
87.9 |
-0.65 |
-0.47 |
8.2 |
89 |
3 |
2 |
6 |
10 |
1 |
3 |
0 |
GOL 301 L
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25 |
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2.18 |
3.04 |
101.2 |
-1.10 |
-0.66 |
11.7 |
90 |
5 |
5 |
10 |
6 |
1 |
3 |
0 |
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26 |
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2.00 |
2.61 |
112.5 |
-0.79 |
-0.56 |
8.4 |
93 |
4 |
3 |
12 |
8 |
1 |
3 |
0 |
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program