 |
PDBsum entry 4nnh
|
|
|
|
 |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
|
|
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
|
|
|
|
|
|
|
|
|
|
Tunnel analysis for: 4nnh calculated with MOLE 2.0
|
PDB id
|
|
|
|
4nnh
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
 |
Tunnels calculated on whole structure |
 |
Tunnels calculated excluding ligands
|
|
|
 |
 |
 |
 |
 |
|
 |
|
|
|
 |
 |
|
 |
|
|
|
 |
4 tunnels,
coloured by tunnel radius |
 |
4 tunnels,
coloured by
tunnel radius
|
4 tunnels,
coloured as in list below
|
|
|
 |
 |
 |
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. |
|
|
 |
|
|
|
 |
Free R
|
 |
|
|
|
|
 |
Length
|
 |
|
|
|
|
 |
HPathy
|
 |
|
|
|
|
 |
HPhob
|
 |
|
|
|
|
 |
Polar
|
 |
|
|
|
|
 |
Rel Mut
|
 |
|
|
|
|
 |
Residue..type
|
 |
|
|
|
|
 |
Ligands
|
 |
|
|
|
|
|
 |
Radius |
 |
1 |
 |
1.35 |
2.37 |
24.9 |
-0.12 |
-0.12 |
16.6 |
82 |
 |
2 |
3 |
1 |
7 |
0 |
0 |
0 |
 |
|
 |
 |
2 |
 |
1.16 |
1.61 |
31.3 |
-0.04 |
-0.05 |
13.3 |
82 |
3 |
3 |
1 |
9 |
0 |
1 |
0 |
|
 |
3 |
 |
1.34 |
2.37 |
37.4 |
-0.55 |
-0.27 |
18.2 |
79 |
3 |
5 |
2 |
9 |
1 |
1 |
0 |
|
 |
4 |
 |
1.34 |
2.35 |
41.1 |
-0.51 |
-0.23 |
19.7 |
84 |
4 |
4 |
2 |
10 |
0 |
0 |
0 |
|
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
 |
Residue-type_colouring |
 |
|
 |
|
Positive
|
Negative
|
Neutral
|
Aliphatic
|
Aromatic
|
Pro & Gly
|
Cysteine
|
|
H,K,R
|
D,E
|
S,T,N,Q
|
A,V,L,I,M
|
F,Y,W
|
P,G
|
C
|
|
|
 |