PDBsum entry 4nfi Go to PDB code:  Tunnel analysis for: 4nfi calculated with MOLE 2.0 PDB id 4nfi Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   0 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.51 1.71 31.1 -2.43 -0.47 31.6 79 7 5 1 2 3 0 0  JD5 401 F MG 403 F 2 1.51 1.70 31.4 -2.56 -0.51 33.0 79 7 5 2 1 2 0 1  JD5 401 F MG 403 F MG 404 F 3 1.53 1.72 32.3 -1.62 -0.32 22.0 84 2 6 2 4 3 0 0  JD5 401 F MG 403 F MG 404 F 4 1.51 1.71 32.6 -1.79 -0.39 24.4 84 2 6 2 3 2 0 1  JD5 401 F MG 403 F MG 404 F 5 1.31 1.31 37.7 -1.12 -0.40 21.1 84 4 6 2 6 1 1 0  JD5 401 F MG 403 F MG 404 F 6 1.31 1.31 37.9 -1.08 -0.41 22.2 84 4 6 2 5 0 1 1  JD5 401 F MG 403 F MG 404 F Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.