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PDBsum entry 4n4o

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Top Page protein ligands metals Protein-protein interface(s) tunnels links
Tunnel analysis for: 4n4o calculated with MOLE 2.0 PDB id
4n4o
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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9 tunnels, coloured by tunnel radius 12 tunnels, coloured by tunnel radius 12 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.15 1.11 79.5 -2.43 -0.54 35.5 76 13 12 3 6 0 1 0  
2 1.18 1.09 91.2 -2.38 -0.56 33.8 78 13 13 5 8 0 1 0  
3 1.11 2.04 109.0 -1.44 -0.27 22.2 78 11 8 7 9 4 4 4  HEC 606 C HEC 607 C HEC 608 C HEC 601 E
4 1.24 1.29 107.8 -1.57 -0.26 25.4 80 16 9 5 7 3 2 3  HEC 608 A HEC 602 E HEC 606 E HEC 607 E
5 1.21 1.93 109.5 -1.58 -0.26 26.4 81 15 9 6 7 3 2 4  HEC 602 C HEC 606 C HEC 607 C HEC 601 E
6 1.16 1.64 111.8 -1.57 -0.33 21.6 76 13 10 5 7 5 4 4  HEC 605 A HEC 606 A HEC 607 A HEC 601 C
7 1.22 1.14 127.7 -1.27 -0.18 24.7 78 16 10 6 9 3 2 8  HEC 601 A HEC 602 A HEC 605 A HEC 606 A HEC 601 C
8 1.13 1.76 133.0 -1.36 -0.13 22.8 79 17 9 7 11 8 4 2  HEC 603 A HEC 604 A HEC 606 C HEC 607 C HEC 608 C
HEC 601 E
9 1.12 1.12 145.7 -1.27 -0.12 21.3 79 19 10 6 14 8 4 2  HEC 608 A HEC 604 C HEC 605 C HEC 606 E HEC 607 E
HEC 608 E
10 1.24 1.26 26.1 -0.87 -0.14 8.8 69 2 1 2 3 3 1 0  
11 1.41 1.53 17.3 -2.10 -0.28 12.4 77 2 0 3 1 2 2 0  
12 1.44 1.44 17.1 -1.93 -0.23 10.9 77 2 0 3 1 2 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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