spacer
spacer

PDBsum entry 4n2e

Go to PDB code: 
Top Page protein ligands metals tunnels links
Tunnel analysis for: 4n2e calculated with MOLE 2.0 PDB id
4n2e
Tunnels calculated on whole structure Tunnels calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
3 tunnels, coloured by tunnel radius 4 tunnels, coloured by tunnel radius 4 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.26 1.39 35.2 -0.82 -0.27 8.2 75 2 2 2 2 3 5 0  
2 1.27 1.40 46.3 -1.12 -0.32 12.8 84 1 6 5 3 1 4 0  
3 1.25 1.25 51.5 -0.54 -0.15 11.3 79 3 2 4 5 3 5 0  
4 1.23 1.28 18.1 -2.09 -0.58 14.0 72 2 0 2 0 1 2 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer