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PDBsum entry 4my0

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Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 4my0 calculated with MOLE 2.0 PDB id
4my0
Pores calculated on whole structure Pores calculated excluding ligands

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11 pores, coloured by radius 12 pores, coloured by radius 12 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.34 1.68 25.2 -1.66 -0.35 24.2 97 5 0 2 3 0 0 0  ACO 400 B
2 2.03 2.20 65.7 -0.51 -0.22 15.2 86 3 6 1 9 4 0 0  ACO 400 B TRS 401 B
3 1.92 3.32 71.3 -1.31 -0.59 21.7 90 4 10 4 6 0 0 0  
4 2.13 3.40 76.6 -2.22 -0.76 24.1 90 3 12 7 6 0 0 0  
5 2.22 3.25 78.6 -2.62 -0.78 22.4 91 7 11 13 4 0 0 0  
6 1.92 3.30 79.6 -2.30 -0.72 22.2 90 7 11 11 4 0 0 0  
7 2.07 3.37 81.6 -2.26 -0.71 24.6 90 4 11 8 6 0 0 0  
8 1.92 3.28 86.5 -2.26 -0.68 20.9 90 8 8 14 4 0 0 0  
9 1.25 2.61 91.1 -1.43 -0.36 25.2 78 8 11 1 10 3 1 0  
10 1.52 2.98 142.2 -1.69 -0.48 21.1 83 12 16 10 12 4 2 0  GOL 402 E
11 1.25 3.46 149.6 -1.81 -0.49 21.5 83 13 15 11 12 4 2 0  GOL 402 E
12 1.26 3.33 160.4 -1.64 -0.51 20.4 82 9 19 9 14 4 2 0  GOL 402 E

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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