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PDBsum entry 4mtf

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 4mtf calculated with MOLE 2.0 PDB id
4mtf
Pores calculated on whole structure Pores calculated excluding ligands

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8 pores, coloured by radius 8 pores, coloured by radius 8 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.52 1.69 29.3 -1.42 -0.52 23.1 80 2 3 3 3 1 1 0  
2 1.91 2.62 36.0 2.13 0.76 1.0 82 0 0 0 12 7 0 0  PX4 1304 A PX4 1304 B PX4 1303 C PX4 1303 D
3 1.65 4.68 46.4 2.13 0.81 0.9 77 0 0 0 10 8 1 0  PX4 1303 A PX4 1304 A PX4 1304 B PX4 1303 C PX4
1303 D
4 1.98 3.00 60.9 2.42 0.89 0.8 82 0 0 0 19 8 2 0  PX4 1304 A PX4 1302 B PX4 1304 B PX4 1303 C PX4
1303 D
5 1.27 1.62 64.5 2.10 0.48 1.3 82 0 2 1 24 4 1 4  
6 1.99 2.97 66.2 2.66 0.97 0.7 81 0 0 0 22 10 2 0  PX4 1304 A PX4 1304 B PX4 1303 C PX4 1303 D
7 1.79 5.21 68.3 1.92 0.69 1.0 81 0 0 0 18 9 2 0  PX4 1303 A PX4 1304 A PX4 1302 B PX4 1304 B PX4
1303 C PX4 1303 D
8 1.91 2.53 71.3 2.11 0.76 0.9 80 0 0 0 21 12 2 0  PX4 1304 A PX4 1304 B PX4 1303 C PX4 1303 D

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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