spacer
spacer

PDBsum entry 4mqb

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) pores links
Pore analysis for: 4mqb calculated with MOLE 2.0 PDB id
4mqb
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
4 pores, coloured by radius 5 pores, coloured by radius 5 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.34 1.34 44.9 -1.51 -0.40 25.7 81 4 7 2 4 1 0 0  
2 1.35 1.33 59.0 -1.47 -0.39 26.1 81 6 9 5 6 1 1 0  
3 1.35 1.33 59.8 -1.63 -0.34 25.8 79 5 7 3 5 4 0 0  MSE 34 A PG4 302 A
4 1.79 3.58 108.9 -1.09 -0.42 14.6 83 4 6 6 5 1 1 0  MSE 57 A MSE 64 A
5 2.46 5.06 138.1 -1.87 -0.51 22.5 80 6 10 6 4 5 0 0  MSE 34 A MSE 57 A MSE 64 A PG4 302 A

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer