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PDBsum entry 4mpl

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Tunnel analysis for: 4mpl calculated with MOLE 2.0 PDB id
4mpl
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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6 tunnels, coloured by tunnel radius 6 tunnels, coloured by tunnel radius 6 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.48 2.42 16.0 -0.06 -0.29 7.2 83 1 1 0 3 0 1 1  
2 1.48 1.52 17.3 0.43 -0.01 7.0 80 1 1 0 3 1 1 1  
3 1.32 1.62 18.3 0.20 -0.17 8.0 75 1 1 0 2 1 1 2  
4 1.47 2.42 19.4 1.18 0.16 2.8 77 0 1 1 4 0 1 2  
5 1.48 2.42 20.7 1.55 0.36 2.5 75 0 1 1 4 1 1 2  
6 1.30 1.61 21.7 1.78 0.37 2.5 72 0 1 1 3 1 1 2  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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