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PDBsum entry 4mlv

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Tunnel analysis for: 4mlv calculated with MOLE 2.0 PDB id
4mlv
Tunnels calculated on whole structure Tunnels calculated excluding ligands

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5 tunnels, coloured by tunnel radius 7 tunnels, coloured by tunnel radius 7 tunnels, coloured as in
list below
Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown.
Tunnels
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.34 1.46 20.1 0.55 -0.21 3.8 75 1 0 1 4 1 0 1  
2 1.27 1.27 22.4 0.44 -0.14 5.7 73 1 0 1 6 2 0 0  DPM 401 A
3 1.34 1.47 29.8 0.65 0.00 9.0 87 3 0 0 7 1 0 0  
4 1.34 1.50 36.1 -0.57 -0.17 16.6 84 6 2 3 6 1 0 1  DPM 401 A
5 1.13 2.28 15.3 1.96 0.77 5.9 82 2 1 2 5 1 0 0  
6 1.13 2.27 16.2 1.75 0.67 6.0 82 2 1 2 5 1 0 0  
7 1.13 2.27 17.2 1.49 0.61 8.4 82 2 2 2 5 1 0 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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