PDBsum entry 4ml9 Go to PDB code:  Tunnel analysis for: 4ml9 calculated with MOLE 2.0 PDB id 4ml9 Tunnels calculated on whole structure Tunnels calculated excluding ligands View options MOLEonline 2.0 manipulation and visualization with HETATM: without HETATM:   0 tunnels, coloured by tunnel radius 5 tunnels, coloured by tunnel radius 5 tunnels, coloured as in list below Tunnels are interior spaces connected with the protein surrounding. Only channels longer than 15 Å are shown. Tunnels Free R Length HPathy HPhob Polar Rel Mut Residue..type Ligands Radius 1 1.30 1.41 18.1 1.98 0.37 1.5 88 0 0 0 7 0 0 0  MSE 190 A 2 1.30 1.57 29.1 -1.83 -0.44 27.7 89 4 4 1 5 0 0 0   3 1.26 1.49 15.6 1.48 0.72 6.0 73 0 2 0 8 1 1 0  MSE 197 A 4 1.27 1.28 17.8 -2.61 -0.62 35.8 79 4 3 0 1 0 0 0   5 1.21 1.35 19.7 1.57 0.20 3.3 86 0 1 0 7 0 0 0  MSE 190 B Residue-type_colouring Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C Acknowledgement Tunnels were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.