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PDBsum entry 4mim

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Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 4mim calculated with MOLE 2.0 PDB id
4mim
Pores calculated on whole structure Pores calculated excluding ligands

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21 pores, coloured by radius 21 pores, coloured by radius 21 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 1.53 1.52 28.2 -0.73 -0.41 18.4 81 3 4 3 6 0 1 0  
2 1.71 1.91 44.9 -1.44 -0.39 17.8 79 3 5 3 4 1 3 0  
3 1.18 1.28 45.9 -0.71 -0.20 19.4 83 3 5 4 6 3 1 0  
4 2.44 3.44 50.4 -2.00 -0.46 23.6 83 7 3 5 3 2 1 0  
5 1.62 1.84 57.1 -1.22 -0.42 16.0 81 5 5 4 7 1 4 0  
6 1.61 1.83 58.1 -1.75 -0.47 19.6 78 6 5 5 5 2 4 0  
7 2.42 3.47 61.8 -1.51 -0.43 18.3 82 7 5 3 6 1 2 0  
8 2.55 2.72 62.8 -2.06 -0.48 22.6 79 8 5 4 4 2 2 0  
9 2.84 3.70 67.4 -0.80 -0.12 22.4 78 5 4 0 4 4 1 0  
10 1.20 1.34 73.1 -1.32 -0.37 20.2 80 7 9 5 8 3 3 0  
11 1.17 1.28 73.2 -1.85 -0.38 27.7 77 8 7 6 4 6 2 0  
12 1.19 1.32 73.9 -1.15 -0.36 17.9 79 5 10 6 10 4 5 0  
13 1.19 1.20 88.3 -1.42 -0.38 20.9 78 6 9 7 10 4 5 0  
14 1.22 1.29 131.7 -1.46 -0.32 21.5 77 8 12 7 9 7 5 0  
15 2.89 3.75 26.9 -1.44 -0.39 17.1 84 3 1 3 5 0 0 0  
16 2.20 2.20 36.3 -0.82 -0.52 15.6 88 2 2 4 5 0 2 0  
17 2.35 2.74 39.2 -1.70 -0.47 20.9 81 5 6 1 5 0 2 0  
18 1.31 1.30 44.7 -1.48 -0.41 20.7 76 5 7 2 6 2 2 0  
19 1.33 1.31 52.1 -1.63 -0.42 23.2 80 7 4 3 4 2 1 0  
20 1.15 1.67 88.0 -1.62 -0.33 16.3 78 5 3 5 6 3 5 0  
21 1.82 1.81 47.2 -0.91 -0.67 17.9 96 0 5 2 10 0 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
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