spacer
spacer

PDBsum entry 4ma8

Go to PDB code: 
Top Page protein ligands Protein-protein interface(s) links
Immune system PDB id
4ma8
Contents
Protein chains
108 a.a.
218 a.a.
213 a.a.
Ligands
Z80
Waters ×444

References listed in PDB file
Key reference
Title Structural basis of prion inhibition by phenothiazine compounds.
Authors P.K.Baral, M.Swayampakula, M.K.Rout, N.N.Kav, L.Spyracopoulos, A.Aguzzi, M.N.James.
Ref. Structure, 2014, 22, 291-303. [DOI no: 10.1016/j.str.2013.11.009]
PubMed id 24373770
Abstract
Conformational transitions of the cellular form of the prion protein, PrP(C), into an infectious isoform, PrP(Sc), are considered to be central events in the progression of fatal neurodegenerative diseases known as transmissible spongiform encephalopathies. Tricyclic phenothiazine compounds exhibit antiprion activity; however, the underlying molecular mechanism of PrP(Sc) inhibition remains elusive. We report the molecular structures of two phenothiazine compounds, promazine and chlorpromazine bound to a binding pocket formed at the intersection of the structured and the unstructured domains of the mouse prion protein. Promazine binding induces structural rearrangement of the unstructured region proximal to β1, through the formation of a "hydrophobic anchor." We demonstrate that these molecules, promazine in particular, allosterically stabilize the misfolding initiator-motifs such as the C terminus of α2, the α2-α3 loop, as well as the polymorphic β2-α2 loop. Hence, the stabilization effects of the phenothiazine derivatives on initiator-motifs induce a PrP(C) isoform that potentially resists oligomerization.
PROCHECK
Go to PROCHECK summary
 Headers

 

spacer

spacer