spacer
spacer

PDBsum entry 4lsu

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) pores links
Pore analysis for: 4lsu calculated with MOLE 2.0 PDB id
4lsu
Pores calculated on whole structure Pores calculated excluding ligands

View options
MOLEonline 2.0 manipulation
and
visualization
with HETATM:
without HETATM:
 
7 pores, coloured by radius 3 pores, coloured by radius 3 pores, coloured as in
list below
Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown.
Pores
Free R
Length
HPathy
HPhob
Polar
Rel Mut
Residue..type
Ligands
Radius
1 2.54 2.55 29.0 0.13 -0.05 10.2 83 1 3 2 3 1 2 0  
2 1.32 1.52 32.1 -0.52 0.15 6.7 76 2 1 6 5 5 2 1  NAG 503 G
3 1.62 2.61 36.5 -1.34 -0.58 14.2 89 2 2 5 3 0 1 0  

Residue-type_colouring
Positive Negative Neutral Aliphatic Aromatic Pro & Gly Cysteine
H,K,R D,E S,T,N,Q A,V,L,I,M F,Y,W P,G C

Acknowledgement
Pores were calculated by MOLE 2.0 program version 2.5.13.11.08 and visualized using Pymol 0.97rc.
spacer
spacer