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PDBsum entry 4lko

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Hydrolase PDB id
4lko
Contents
Protein chain
728 a.a.
Ligands
1WH ×2
Waters ×98

References listed in PDB file
Key reference
Title Optimization of activity, Selectivity, And liability profiles in 5-Oxopyrrolopyridine dpp4 inhibitors leading to clinical candidate (sa)-2-(3-(Aminomethyl)-4-(2,4-Dichlorophenyl)-2-Methyl-5-Oxo-5h-Pyrrolo[3,4-B]pyridin-6(7h)-Yl)-N,N-Dimethylacetamide (bms-767778).
Authors P.Devasthale, Y.Wang, W.Wang, J.Fevig, J.Feng, A.Wang, T.Harrity, D.Egan, N.Morgan, M.Cap, A.Fura, H.E.Klei, K.Kish, C.Weigelt, L.Sun, P.Levesque, F.Moulin, Y.X.Li, R.Zahler, M.S.Kirby, L.G.Hamann.
Ref. J Med Chem, 2013, 56, 7343-7357. [DOI no: 10.1021/jm4008906]
PubMed id 23964740
Abstract
Optimization of a 5-oxopyrrolopyridine series based upon structure-activity relationships (SARs) developed from our previous efforts on a number of related bicyclic series yielded compound 2s (BMS-767778) with an overall activity, selectivity, efficacy, PK, and developability profile suitable for progression into the clinic. SAR in the series and characterization of 2s are described.
Secondary reference #1
Title Structural basis of proline-Specific exopeptidase activity as observed in human dipeptidyl peptidase-Iv.
Authors R.Thoma, B.Löffler, M.Stihle, W.Huber, A.Ruf, M.Hennig.
Ref. Structure, 2003, 11, 947-959. [DOI no: 10.1016/S0969-2126(03)00160-6]
PubMed id 12906826
Full text Abstract
Figure 4.
Figure 4. Access to the Active SiteSchematic view on the subunit of DPP-IV with the active site surface colored according to the atom types. The substrate diprotin A is shown with white carbons indicating the substrate binding site. Arrows illustrate that the substrate may enter the active site at the well-accessible and open active site cleft and that the dipeptidic product of the catalytic reaction may leave the active site cavity via the narrower tunnel that is formed by the b propeller.
The above figure is reproduced from the cited reference with permission from Cell Press
PROCHECK
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