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PDBsum entry 4ljd
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Pore analysis for: 4ljd calculated with  MOLE 2.0
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PDB id
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4ljd
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Pores calculated on whole structure |
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Pores calculated excluding ligands
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1 pore,
coloured by radius |
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7 pores,
coloured by radius
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7 pores,
coloured as in
list below
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Pores are connected internal spaces going through the structure. Only pores longer than 25 Å are shown. |
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Free R
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Length
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HPathy
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HPhob
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Polar
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Rel Mut
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Residue..type
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Ligands
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Radius |
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1 |
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2.06 |
2.21 |
25.1 |
0.04 |
-0.26 |
7.2 |
82 |
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2 |
1 |
1 |
4 |
0 |
0 |
0 |
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SO4 301 D
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2 |
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1.66 |
1.79 |
28.5 |
-1.77 |
-0.83 |
20.5 |
90 |
4 |
5 |
0 |
0 |
0 |
0 |
0 |
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3 |
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1.58 |
1.58 |
36.0 |
-2.29 |
-0.71 |
30.9 |
81 |
2 |
6 |
0 |
2 |
0 |
2 |
0 |
SO4 305 A SO4 301 D
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4 |
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1.11 |
2.46 |
36.3 |
-0.96 |
-0.35 |
12.9 |
75 |
4 |
2 |
2 |
2 |
3 |
2 |
1 |
CR8 64 B MHO 159 B
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5 |
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1.61 |
2.08 |
101.4 |
-2.17 |
-0.41 |
31.6 |
84 |
13 |
5 |
2 |
5 |
0 |
1 |
0 |
SO4 302 D SO4 304 D
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6 |
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1.30 |
1.45 |
139.8 |
-1.01 |
-0.28 |
17.7 |
78 |
8 |
4 |
3 |
7 |
1 |
1 |
0 |
SO4 304 B
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7 |
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1.33 |
1.49 |
217.5 |
-1.80 |
-0.35 |
24.7 |
81 |
19 |
8 |
8 |
10 |
1 |
2 |
0 |
SO4 304 B SO4 302 D SO4 304 D
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Residue-type_colouring |
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Positive
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Negative
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Neutral
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Aliphatic
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Aromatic
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Pro & Gly
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Cysteine
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H,K,R
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D,E
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S,T,N,Q
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A,V,L,I,M
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F,Y,W
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P,G
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C
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MOLE 2.0 program