spacer
spacer

PDBsum entry 4lfh

Go to PDB code: 
Top Page protein ligands metals Protein-protein interface(s) links
Immune system PDB id
4lfh
Contents
Protein chains
202 a.a.
222 a.a.
Ligands
NAG-NAG
ACT
Metals
_NA ×2
Waters ×215

References listed in PDB file
Key reference
Title Cd1d-Lipid antigen recognition by the γδ tcr.
Authors A.P.Uldrich, J.Le nours, D.G.Pellicci, N.A.Gherardin, K.G.Mcpherson, R.T.Lim, O.Patel, T.Beddoe, S.Gras, J.Rossjohn, D.I.Godfrey.
Ref. Nat Immunol, 2013, 14, 1137-1145. [DOI no: 10.1038/ni.2713]
PubMed id 24076636
Abstract
The T cell repertoire comprises αβ and γδ T cell lineages. Although it is established how αβ T cell antigen receptors (TCRs) interact with antigen presented by antigen-presenting molecules, this is unknown for γδ TCRs. We describe a population of human Vδ1(+) γδ T cells that exhibit autoreactivity to CD1d and provide a molecular basis for how a γδ TCR binds CD1d-α-galactosylceramide (α-GalCer). The γδ TCR docked orthogonally, over the A' pocket of CD1d, in which the Vδ1-chain, and in particular the germ line-encoded CDR1δ loop, dominated interactions with CD1d. The TCR γ-chain sat peripherally to the interface, with the CDR3γ loop representing the principal determinant for α-GalCer specificity. Accordingly, we provide insight into how a γδ TCR binds specifically to a lipid-loaded antigen-presenting molecule.
PROCHECK
Go to PROCHECK summary
 Headers

 

spacer

spacer